RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 IL12RB2Q99665 862 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 ZDHHC6Q9H6R6 413 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 CD93Q9NPY3 652 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 RBM22Q9NW64 420 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRKCB-205ENST00000472066 HCN4Q9Y3Q4 1203 aa12.5□□□□□ -0.41
PRKCB-205ENST00000472066 TTC24A2A3L6 582 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 H7C0C1 242 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 KCNK1O00180 336 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 CEP104O60308 925 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 LEFTY1O75610 366 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 JCHAINP01591 159 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 IGLV3-19P01714 112 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 ATP5OP48047 213 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 SCNN1BP51168 640 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 METAP1P53582 386 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 IFI35P80217 286 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 RAD51Q06609 339 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 SFSWAPQ12872 951 aaKnown RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 GDPD4Q6W3E5 623 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 HDDC3Q8N4P3 179 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 FRMD1Q8N878 549 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 GRIN3AQ8TCU5 1115 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 PBKQ96KB5 322 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 QKIQ96PU8 341 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 WDR24Q96S15 920 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 FAM118BQ9BPY3 351 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 MGME1Q9BQP7 344 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 NT5MQ9NPB1 228 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 FBXL12Q9NXK8 326 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 NCKAP1Q9Y2A7 1128 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 R3HDM2Q9Y2K5 976 aaKnown RBP12.49□□□□□ -0.41
PRKCB-205ENST00000472066 ATP8A1Q9Y2Q0 1164 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 R4GN57 208 aa12.49□□□□□ -0.41
PRKCB-205ENST00000472066 ZDBF2Q9HCK1 2354 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 IGHV1OR15-9A0A0B4J2B8 117 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 KPNA3O00505 521 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 GJB3O75712 270 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 NEBLO76041 1014 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 RBP3P10745 1247 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 CR2P20023 1033 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 RBL1P28749 1068 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 OXTRP30559 389 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 DRD3P35462 400 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 MAXP61244 160 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 ITKQ08881 620 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 ZBTB17Q13105 803 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 GRM3Q14832 879 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 POM121L1PQ3SYA9 428 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 TTC31Q49AM3 519 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 ZC3H14Q6PJT7 736 aaKnown RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 USP30Q70CQ3 517 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 ADAT2Q7Z6V5 191 aaKnown RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 GANCQ8TET4 914 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 HTR3CQ8WXA8 447 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 NSMCE3Q96MG7 304 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 OMDQ99983 421 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 OSBPL1AQ9BXW6 950 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 POLR1EQ9GZS1 481 aaKnown RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 C10orf88Q9H8K7 445 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 SEPT10Q9P0V9 454 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 MBD1Q9UIS9 605 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-205ENST00000472066 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
PRKCB-205ENST00000472066 CHD5Q8TDI0 1954 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 A0A1W2PP55 124 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 BCLAF3A2AJT9 711 aaKnown RBP12.47□□□□□ -0.41
PRKCB-205ENST00000472066 PLK4O00444 970 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 MTSS1O43312 755 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 RNASEH2AO75792 299 aaKnown RBP12.47□□□□□ -0.41
PRKCB-205ENST00000472066 PIGNO95427 931 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 FGGP02679 453 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
PRKCB-205ENST00000472066 UGT2B4P06133 528 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms