RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CCNG2Q16589 344 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RFX4Q33E94 735 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZIK1Q3SY52 487 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KYQ8NBH2 561 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SERPINB11Q96P15 392 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ITGA11Q9UKX5 1188 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 HES2Q9Y543 173 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FFAR2O15552 330 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LSM3P62310 102 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 IRF8Q02556 426 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PPIL2Q13356 520 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SQLEQ14534 574 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ARMCX6Q7L4S7 300 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TELO2Q9Y4R8 837 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SSNA1O43805 119 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OR5F1O95221 314 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 BMP7P18075 431 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SF1Q15637 639 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ABHD5Q8WTS1 349 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 QKIQ96PU8 341 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■□ 26.5
NPHP3-ACAD11-201ENST00000471702 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CDH17Q12864 832 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 IZUMO2Q6UXV1 221 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RBM43Q6ZSC3 357 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 HAVCR1Q96D42 359 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GAS2L1Q99501 681 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NOD2Q9HC29 1040 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ELOVL2Q9NXB9 296 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 WBP11Q9Y2W2 641 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 EVPLQ92817 2033 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 POLR1AO95602 1720 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KPNB1Q14974 876 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OR2L5Q8NG80 312 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SUN3Q8TAQ9 357 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MNTQ99583 582 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CROTQ9UKG9 612 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 A0A096LPK6 155 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RGS20O76081 388 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CACNA2D1P54289 1103 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TRAF3Q13114 568 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MPPE1Q53F39 396 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LPPQ93052 612 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TMEM68Q96MH6 324 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PSMD13Q9UNM6 376 aa13.37□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PLOD3O60568 738 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OMPP47874 163 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PKNOX1P55347 436 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MGAT5Q09328 741 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MADCAM1Q13477 382 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 METTL7BQ6UX53 244 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NDNQ99608 321 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 JCADQ9P266 1359 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PSMD9O00233 223 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NCAM2O15394 837 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MATN4O95460 622 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ELK3P41970 407 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAB21L3Q8N8X9 362 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ATG10Q9H0Y0 220 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CLIC5Q9NZA1 410 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TPRP12270 2363 aaKnown RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF846Q147U1 533 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 C2orf49Q9BVC5 232 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PLK2Q9NYY3 685 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 L1RE1Q9UN81 338 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 VSTM5A8MXK1 200 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SGTAO43765 313 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF432O94892 652 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 XKR6Q5GH73 641 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FAM81AQ8TBF8 368 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SMPDL3BQ92485 455 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAGEB18Q96M61 343 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ELOVL4Q9GZR5 314 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 POLR1EQ9GZS1 481 aaKnown RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms