RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PAFAH2Q99487 392 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 NOL6Q9H6R4 1146 aaKnown RBP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 GLOD4Q9HC38 313 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 HEBP1Q9NRV9 189 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 BFARQ9NZS9 450 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 ZMYM5Q9UJ78 669 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 MAGEB16A2A368 324 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 F5H423 210 aaPredicted RBP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 LEFTY2O00292 366 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 RAMP2O60895 175 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CNTN5O94779 1100 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 LATS1O95835 1130 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 OLFM2O95897 454 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 PGAM1P18669 254 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 KRT15P19012 456 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CD72P21854 359 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 WEE1P30291 646 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 POLD3Q15054 466 aaPredicted RBP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 GLIPR1L2Q4G1C9 344 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 LGSNQ5TDP6 509 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 STEAP4Q687X5 459 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CASC4Q6P4E1 433 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 UNC5AQ6ZN44 842 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 ARHGAP36Q6ZRI8 547 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 LGI2Q8N0V4 545 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CNTD1Q8N815 330 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 SLC44A1Q8WWI5 657 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 KLF16Q9BXK1 252 aaPredicted RBP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 SLC2A4RGQ9NR83 387 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 GTSE1Q9NYZ3 720 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF212Q9UDV6 495 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 ARHGAP26Q9UNA1 814 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 WNT6Q9Y6F9 365 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 VPS13AQ96RL7 3174 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 IQANK1A0A1B0GTG1 560 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 STK25O00506 426 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 INHBAP08476 426 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 BRAFP15056 766 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 OR1E1P30953 314 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 GEMP55040 296 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
HSPG2-208ENST00000471322 SLC7A9P82251 487 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF77Q15935 545 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 KBTBD12Q3ZCT8 623 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF449Q6P9G9 518 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 TRABD2AQ86V40 505 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 SLC26A11Q86WA9 606 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 LRRC6Q86X45 466 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 FLCNQ8NFG4 579 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 WBP2Q969T9 261 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 PBXIP1Q96AQ6 731 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 HMCESQ96FZ2 354 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 ZFRQ96KR1 1074 aaKnown RBP17.75■□□□□ 0.43
HSPG2-208ENST00000471322 GORASP1Q9BQQ3 440 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 EBF3Q9H4W6 596 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 INTS9Q9NV88 658 aaKnown RBP17.75■□□□□ 0.43
HSPG2-208ENST00000471322 SAMD15Q9P1V8 674 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
HSPG2-208ENST00000471322 GOLGA6L7A0A1B0GV03 622 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SOBPA7XYQ1 873 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 STC2O76061 302 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 ALDH1A2O94788 518 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 ARSAP15289 507 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 CHN1P15882 459 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 MGAT1P26572 445 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SOX9P48436 509 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SLC18A1P54219 525 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 CDH4P55283 916 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 IL10RBQ08334 325 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SLC44A4Q53GD3 710 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 TTC19Q6DKK2 380 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-208ENST00000471322 DENND1CQ8IV53 801 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SRRM1Q8IYB3 904 aaKnown RBP17.74■□□□□ 0.43
HSPG2-208ENST00000471322 DNAAF3Q8N9W5 541 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 USP33Q8TEY7 942 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 DCAKDQ8WVC6 231 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 IRF7Q92985 503 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 TTC17Q96AE7 1141 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SMC6Q96SB8 1091 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 MLPHQ9BV36 600 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-208ENST00000471322 EPN3Q9H201 632 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 LINC00597Q9H2U6 94 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 KIF9Q9HAQ2 790 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SP110Q9HB58 689 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 KCNK9Q9NPC2 374 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 ARHGEF3Q9NR81 526 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 HAUS2Q9NVX0 235 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 THG1LQ9NWX6 298 aaKnown RBP17.74■□□□□ 0.43
HSPG2-208ENST00000471322 OBP2AQ9NY56 170 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF180Q9UJW8 692 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 SMG5Q9UPR3 1016 aaKnown RBP17.74■□□□□ 0.43
HSPG2-208ENST00000471322 F5P12259 2224 aa17.74■□□□□ 0.43
HSPG2-208ENST00000471322 OTOL1A6NHN0 477 aaPredicted RBP17.73■□□□□ 0.43
HSPG2-208ENST00000471322 ARNTLO00327 626 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 CLDN11O75508 207 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 POLBP06746 335 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms