RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KRT7P08729 469 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 ALPIP09923 528 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 POU3F2P20265 443 aaPredicted RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 PDCP20941 246 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 RRM1P23921 792 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 NR2F2P24468 414 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 UQCRFS1P47985 274 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 BLKP51451 505 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 CLCN6P51797 869 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 YPEL5P62699 121 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 KRT83P78385 493 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 CUL2Q13617 745 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 STK38Q15208 465 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 NFIL3Q16649 462 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 SYPL2Q5VXT5 272 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 FBXL22Q6P050 247 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 TICAM1Q8IUC6 712 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 LINC00301Q8NCQ3 95 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 TFAP2BQ92481 460 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 ABHD17AQ96GS6 310 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 TRIM62Q9BVG3 475 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 MIS12Q9H081 205 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 AKAP7Q9P0M2 348 aaPredicted RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 SLC12A6Q9UHW9 1150 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 GPR34Q9UPC5 381 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 RNF215Q9Y6U7 377 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 WASF2Q9Y6W5 498 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 LRRK1Q38SD2 2015 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 TRPM6Q9BX84 2022 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 M0QYV0 167 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 TOR1BO14657 336 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 CAPN5O15484 640 aaPredicted RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 SMAD6O43541 496 aaKnown RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 TSPAN6O43657 245 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 SNAP91O60641 907 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 PPP6R2O75170 966 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 TRUB2O95900 331 aaKnown RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 ELAVL4P26378 380 aaKnown RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 L1CAMP32004 1257 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 PSMC2P35998 433 aaKnown RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 MLLT10P55197 1068 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 C16orf72Q14CZ0 275 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 PHF19Q5T6S3 580 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 ZNF787Q6DD87 383 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 C22orf39Q6P5X5 142 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 DPY19L3Q6ZPD9 716 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 SPRED1Q7Z699 444 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 Q8N9G6 341 aaPredicted RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 SLC45A3Q96JT2 553 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 PSMB7Q99436 277 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 MUC3BQ9H195 1237 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
LSM2-209ENST00000470083 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.45
LSM2-209ENST00000470083 VPS51Q9UID3 782 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.45
LSM2-209ENST00000470083 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.46
LSM2-209ENST00000470083 A1L4Q6 167 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 VPS4BO75351 444 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 CLDN11O75508 207 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 CNTN5O94779 1100 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 PAEPP09466 180 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 RNF224P0DH78 156 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 SLC2A3P11169 496 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 CCL4P13236 92 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 PNLIPP16233 465 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 GLB1P16278 677 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 UGT1A3P35503 534 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 IGFALSP35858 605 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 EIF4A3P38919 411 aaKnown RBP12.2□□□□□ -0.46
LSM2-209ENST00000470083 IRAK1P51617 712 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 ARSDP51689 593 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 HK3P52790 923 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 AUHQ13825 339 aaKnown RBP12.2□□□□□ -0.46
LSM2-209ENST00000470083 CNGA2Q16280 664 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 CERCAMQ5T4B2 595 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 PARS2Q7L3T8 475 aaKnown RBP12.2□□□□□ -0.46
LSM2-209ENST00000470083 TMPRSS9Q7Z410 1059 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 GKN2Q86XP6 184 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 GRAMD1CQ8IYS0 662 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 UBR7Q8N806 425 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 GPR156Q8NFN8 814 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 APOBEC4Q8WW27 367 aaKnown RBP12.2□□□□□ -0.46
LSM2-209ENST00000470083 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 TAAR9Q96RI9 348 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 TNKS2Q9H2K2 1166 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 SEMA6CQ9H3T2 930 aa12.2□□□□□ -0.46
LSM2-209ENST00000470083 VPS4AQ9UN37 437 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms