RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DCUN1D1Q96GG9 259 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 CELF6Q96J87 481 aaKnown RBP13.83□□□□□ -0.2
BRCA1-209ENST00000470026 CDRT15Q96T59 188 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 TRIM4Q9C037 500 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 TREX1Q9NSU2 369 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 BCAP29Q9UHQ4 241 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-209ENST00000470026 MYLKQ15746 1914 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TCAF2A6NFQ2 919 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 ACOT8O14734 319 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 HTR7P34969 479 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 PGGT1BP53609 377 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 POLE2P56282 527 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 MANEALQ5VSG8 457 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TMEM198Q66K66 360 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TWF2Q6IBS0 349 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TLK2Q86UE8 772 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 PELI3Q8N2H9 469 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 C2CD4AQ8NCU7 369 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 ADCY4Q8NFM4 1077 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 NXNL1Q96CM4 212 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 SCYL1Q96KG9 808 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 PPP1R2P1Q96PQ5 205 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 RTP3Q9BQQ7 232 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 DMAP1Q9NPF5 467 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TCAF1Q9Y4C2 921 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 FAM95CA0A1B0GW59 222 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 SDHDO14521 159 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 STMN1P16949 149 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 GLRBP48167 497 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 RAB27AP51159 221 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 MPP1Q00013 466 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 MS4A2Q01362 244 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 FLOT2Q14254 428 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 TLR1Q15399 786 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CCL15Q16663 113 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 ESRP1Q6NXG1 681 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 FAM171BQ6P995 826 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 ARHGAP36Q6ZRI8 547 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 EP400NLQ6ZTU2 488 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CHSY3Q70JA7 882 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 PIWIL4Q7Z3Z4 852 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CATSPER1Q8NEC5 780 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 UBE2OQ9C0C9 1292 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 ACSS2Q9NR19 701 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 CACNG4Q9UBN1 327 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 RAB26Q9ULW5 256 aa13.82□□□□□ -0.2
BRCA1-209ENST00000470026 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
BRCA1-209ENST00000470026 A0A087X1B8 175 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 SMIM31A0A1B0GVY4 71 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 TRPC5OSA6NMA1 111 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MEIS3P2A8K0S8 358 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 CLGNO14967 610 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MATN3O15232 486 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MAFKO60675 156 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 DNAJA2O60884 412 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 VAPBO95292 243 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 ZNF865P0CJ78 1059 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 ME2P23368 584 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 EPHX2P34913 555 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 AVPR1AP37288 418 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 CLCNKBP51801 687 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 GEMP55040 296 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 CREB5Q02930 508 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 AFMIDQ63HM1 303 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 KIAA0930Q6ICG6 404 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 LZTR1Q8N653 840 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 NDUFA13Q9P0J0 144 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 COMMD3-BMI1R4GMX3 469 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 UTRNP46939 3433 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 C15orf38-AP3S2A0A0A6YYH1 394 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 MT-CYBP00156 380 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-209ENST00000470026 PCSK1P29120 753 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 SLC1A2P43004 574 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 TAS2R39P59534 338 aa13.81□□□□□ -0.2
BRCA1-209ENST00000470026 POU4F1Q01851 419 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms