RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CDT1Q9H211 546 aa6.65□□□□□ -1.34
PTCD3-208ENST00000469585 ALG13Q9NP73 1137 aaKnown RBP6.65□□□□□ -1.34
PTCD3-208ENST00000469585 KLHL11Q9NVR0 708 aa6.65□□□□□ -1.34
PTCD3-208ENST00000469585 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
PTCD3-208ENST00000469585 AURKAIP1Q9NWT8 199 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-208ENST00000469585 ADAM28Q9UKQ2 775 aa6.65□□□□□ -1.34
PTCD3-208ENST00000469585 UBQLN1Q9UMX0 589 aaKnown RBP6.65□□□□□ -1.34
PTCD3-208ENST00000469585 HES2Q9Y543 173 aa6.65□□□□□ -1.34
PTCD3-208ENST00000469585 PCDHGB6Q9Y5F9 930 aa6.65□□□□□ -1.34
PTCD3-208ENST00000469585 SIP14410 1827 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 BICDL2A1A5D9 508 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 CCDC78A2IDD5 438 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 AHRRA9YTQ3 701 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 E9PLN8 166 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 H7C4K7 107 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 PSMA7O14818 248 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 STX10O60499 249 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 EXOC3O60645 756 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 CXCL14O95715 111 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 PIGRP01833 764 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TPM2P07951 284 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 MYF5P13349 255 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 P4HA1P13674 534 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 KLRC2P26717 231 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 ELF1P32519 619 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 PNPLA4P41247 253 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 GLUD2P49448 558 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 GATMP50440 423 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 RNASE9P60153 205 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 PSMC1P62191 440 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 MAPK7Q13164 816 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TPD52L1Q16890 204 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 KNOP1Q1ED39 458 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 DCLRE1AQ6PJP8 1040 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 DSTYKQ6XUX3 929 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 KRBA2Q6ZNG9 492 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 DAW1Q8N136 415 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 GPD1LQ8N335 351 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 ELMOD1Q8N336 334 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 AOPEPQ8N6M6 819 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 OR56A1Q8NGH5 318 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 STAMQ92783 540 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 CASP10Q92851 521 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 APIPQ96GX9 242 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 IGSF21Q96ID5 467 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TIGD1Q96MW7 591 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 GUCD1Q96NT3 240 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 GSDMAQ96QA5 445 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 CDK5RAP1Q96SZ6 601 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 VKORC1Q9BQB6 163 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 FAM213AQ9BRX8 229 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TLR10Q9BXR5 811 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TEX101Q9BY14 249 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 BLZF1Q9H2G9 400 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 ASB7Q9H672 318 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF703Q9H7S9 590 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 NRDE2Q9H7Z3 1164 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 RBAKQ9NYW8 714 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 CEP72Q9P209 647 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 EIF2B4Q9UI10 523 aaKnown RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 AGAP1Q9UPQ3 857 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 SORCS3Q9UPU3 1222 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 MED16Q9Y2X0 877 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 DERAQ9Y315 318 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 TSC22D4Q9Y3Q8 395 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 USP15Q9Y4E8 981 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-208ENST00000469585 MTCH2Q9Y6C9 303 aa6.64□□□□□ -1.35
PTCD3-208ENST00000469585 A0A0B4J269 797 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 ANO9A1A5B4 782 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CASTOR2A6NHX0 329 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF785A8K8V0 405 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 EXTL3O43909 919 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 GALTP07902 379 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 KRT19P08727 400 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CXCL8P10145 99 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 EPB41P11171 864 aaKnown RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 ODC1P11926 461 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 TNNI1P19237 187 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CYP3A5P20815 502 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 NRIP1P48552 1158 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 SLC11A1P49279 550 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CYP2J2P51589 502 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 AP3M2P53677 418 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 TFAMQ00059 246 aaKnown RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CETN1Q12798 172 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 TRPC3Q13507 836 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 SPATS1Q496A3 300 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 PDCD4Q53EL6 469 aaKnown RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 SPDYAQ5MJ70 313 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 LIN9Q5TKA1 542 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 GDF7Q7Z4P5 450 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 RBM23Q86U06 439 aaKnown RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 NELFCDQ8IXH7 590 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms