RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM205AQ6ZU69 1335 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ADGRA2Q96PE1 1338 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 MARF1Q9Y4F3 1742 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MYH3P11055 1940 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 C1orf232A0A0U1RR37 186 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PRSS51A0A1B0GVH4 220 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ESYT2A0FGR8 921 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GOLGA8IPA6NC78 632 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PRR23AA6NEV1 266 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SDR42E2A6NKP2 422 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TRPC5OSA6NMA1 111 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MINDY4BA8MYZ0 360 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 HNRNPCL2B2RXH8 293 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PI4K2BG5E9Z4 385 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 DNALI1O14645 258 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TRDMT1O14717 391 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ANGPT2O15123 496 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PLSCR1O15162 318 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGEF9O43307 516 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PSTPIP1O43586 416 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 EIF4EBP3O60516 100 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MRPS14O60783 128 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 NDUFS2O75306 463 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RFPL2O75678 378 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SERPINI2O75830 405 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 BCAS2O75934 225 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SNAPC5O75971 98 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SNX4O95219 450 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CPNE6O95741 557 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ASS1P00966 412 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PRLP01236 227 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CD4P01730 458 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PCCAP05165 728 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MYL3P08590 195 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GSTP1P09211 210 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 FCGR1AP12314 374 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MYL6BP14649 208 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF26P17031 533 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ME2P23368 584 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CXCR2P25025 360 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RBL1P28749 1068 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PRKAR1BP31321 381 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ETV4P43268 484 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PHKA1P46020 1223 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PSMD8P48556 350 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SLC9A3P48764 834 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TUFMP49411 452 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SLC26A2P50443 739 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SERPINB9P50453 376 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PPP5CP53041 499 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TPTEP56180 551 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MRPS9P82933 396 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MPP1Q00013 466 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ID3Q02535 119 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 KDSRQ06136 332 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GALNT2Q10471 571 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 EPS8Q12929 822 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GRM1Q13255 1194 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TOP3AQ13472 1001 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TCIRG1Q13488 830 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PWP1Q13610 501 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SLC12A1Q13621 1099 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 FLOT2Q14254 428 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 KCTD2Q14681 263 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SEC23AQ15436 765 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 STILQ15468 1287 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SIX1Q15475 284 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 IL17AQ16552 155 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF792Q3KQV3 632 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 LEXMQ3ZCV2 418 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 FAXCQ5TGI0 409 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 METTL2BQ6P1Q9 378 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 OGFOD3Q6PK18 319 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ABRAXAS1Q6UWZ7 409 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 STXBP4Q6ZWJ1 553 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CBLL1Q75N03 491 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 KCTD20Q7Z5Y7 419 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 NEK8Q86SG6 692 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 AMIGO2Q86SJ2 522 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RNF180Q86T96 592 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TTC7BQ86TV6 843 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 IGFN1Q86VF2 1251 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RIOX2Q8IUF8 465 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 C12orf56Q8IXR9 622 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PALM2Q8IXS6 379 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TCEAL8Q8IYN2 117 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ADGRF2Q8IZF7 708 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PARP8Q8N3A8 854 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GALNT4Q8N4A0 578 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 DCLK2Q8N568 766 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 UBR7Q8N806 425 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ANKFN1Q8N957 763 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TDRD5Q8NAT2 981 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 AGBL5Q8NDL9 886 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GLIS3Q8NEA6 775 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PLBD2Q8NHP8 589 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RP9Q8TA86 221 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 LHFPL5Q8TAF8 219 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ENKURQ8TC29 256 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms