RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PCID2Q5JVF3 399 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 TMEM135Q86UB9 458 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 ARID3BQ8IVW6 561 aaPredicted RBP19.22■□□□□ 0.67
SMC4-209ENST00000468653 SLC25A41Q8N5S1 370 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMC4-209ENST00000468653 RIN3Q8TB24 985 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 ITFG1Q8TB96 612 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 PPP2R3CQ969Q6 453 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 TADA1Q96BN2 335 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 FCRL3Q96P31 734 aaPredicted RBP19.22■□□□□ 0.67
SMC4-209ENST00000468653 CDCA3Q99618 268 aaPredicted RBP19.22■□□□□ 0.67
SMC4-209ENST00000468653 IGFLR1Q9H665 355 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 KCNK9Q9NPC2 374 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 CHRAC1Q9NRG0 131 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 KIAA1522Q9P206 1035 aaPredicted RBP19.22■□□□□ 0.67
SMC4-209ENST00000468653 TBC1D14Q9P2M4 693 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 HELZP42694 1942 aaKnown RBP19.22■□□□□ 0.67
SMC4-209ENST00000468653 ZMPSTE24O75844 475 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 SERPINF2P08697 491 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 BRAFP15056 766 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 MDH1P40925 334 aaKnown RBP19.21■□□□□ 0.67
SMC4-209ENST00000468653 CHRNA4P43681 627 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 GNGT1P63211 74 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 GUCY1A3Q02108 690 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 CYTH1Q15438 398 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 ALG1LQ6GMV1 187 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 POTEHQ6S545 545 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 LINGO4Q6UY18 593 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 UNC5BQ8IZJ1 945 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 DCAF4L2Q8NA75 395 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 PPHLN1Q8NEY8 458 aaKnown RBP19.21■□□□□ 0.67
SMC4-209ENST00000468653 FIBINQ8TAL6 211 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 IFT43Q96FT9 208 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 TRABDQ9H4I3 376 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 ARNT2Q9HBZ2 717 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 SENP1Q9P0U3 644 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 FAM169AQ9Y6X4 670 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 PDE4DIPQ5VU43 2346 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 RFXAPO00287 272 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 GJB3O75712 270 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 CREB1P16220 341 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 MGAT5Q09328 741 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 IHHQ14623 411 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 ZNF77Q15935 545 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 LGSNQ5TDP6 509 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 VN1R2Q8NFZ6 395 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 MDM1Q8TC05 714 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 ALG14Q96F25 216 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 CERS2Q96G23 380 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 C2orf49Q9BVC5 232 aaPredicted RBP19.21■□□□□ 0.67
SMC4-209ENST00000468653 KIFC1Q9BW19 673 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 DZANK1Q9NVP4 752 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 VPS51Q9UID3 782 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 ZNF180Q9UJW8 692 aa19.21■□□□□ 0.67
SMC4-209ENST00000468653 FAM155BO75949 473 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 TMCC1O94876 653 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 SCNN1BP51168 640 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 LMAN2Q12907 356 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 USP4Q13107 963 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 FYB2Q5VWT5 728 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 PKN3Q6P5Z2 889 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 TMEM25Q86YD3 366 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 APCDD1Q8J025 514 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 MRPL38Q96DV4 380 aaKnown RBP19.2■□□□□ 0.66
SMC4-209ENST00000468653 MFSD3Q96ES6 412 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 SMC6Q96SB8 1091 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 SCUBE2Q9NQ36 999 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 CLEC4EQ9ULY5 219 aa19.2■□□□□ 0.66
SMC4-209ENST00000468653 ZCWPW2A0A1B0GU75 182 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 A0A1W2PPM1 405 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 TMEM120BA0PK00 339 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 UGT1A9O60656 530 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 KRT37O76014 449 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 ERVK-10P10266 1014 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 CHN1P15882 459 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 TCF3P15923 654 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 CES1P23141 567 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 NMBRP28336 390 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 GBP2P32456 591 aaPredicted RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 RGRP47804 291 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 SERPINH1P50454 418 aaKnown RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 CDK18Q07002 472 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 NAB1Q13506 487 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 KCNC3Q14003 757 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 SEPT6Q14141 434 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 FRG1Q14331 258 aaKnown RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 SLC1A5Q15758 541 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 INO80DQ53TQ3 878 aaPredicted RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 RARS2Q5T160 578 aaKnown RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 RETSATQ6NUM9 610 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 ZNF449Q6P9G9 518 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 PTCD2Q8WV60 388 aaKnown RBP19.19■□□□□ 0.66
SMC4-209ENST00000468653 FEM1CQ96JP0 617 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 EXOC2Q96KP1 924 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 UGT1A7Q9HAW7 530 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 UGT1A10Q9HAW8 530 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 UGT1A8Q9HAW9 530 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 NOD2Q9HC29 1040 aa19.19■□□□□ 0.66
SMC4-209ENST00000468653 ZFATQ9P243 1243 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms