RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TBC1D3HP0C7X1 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 ETFBP38117 255 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 DNA2P51530 1060 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TPI1P60174 286 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 SLC20A2Q08357 652 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 PIGHQ14442 188 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 ACAP1Q15027 740 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 PPP6R3Q5H9R7 873 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3CQ6IPX1 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 NEK5Q6P3R8 708 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TMPRSS12Q86WS5 348 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TRIM69Q86WT6 500 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3Q8IZP1 549 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 RTL3Q8N8U3 475 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 SERAC1Q96JX3 654 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 CCDC42Q96M95 316 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 MAGEH1Q9H213 219 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TNKS2Q9H2K2 1166 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 PREBQ9HCU5 417 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 IP6K2Q9UHH9 426 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 ANAPC7Q9UJX3 599 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 NEU3Q9UQ49 428 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 BTBD3Q9Y2F9 522 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 ACACAQ13085 2346 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 KNTC1P50748 2209 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 ITPR1Q14643 2758 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ZFYVE26Q68DK2 2539 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 SSU72P8A0A1W2PR75 194 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 MYO1FO00160 1098 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 PLK4O00444 970 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 PLRG1O43660 514 aaKnown RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ZMPSTE24O75844 475 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 LDOC1O95751 146 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ITGAVP06756 1048 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 DRD3P35462 400 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 SSR1P43307 286 aaKnown RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 RECQLP46063 649 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 CLCN6P51797 869 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ARF5P84085 180 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 TBX2Q13207 712 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ILKQ13418 452 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 POM121L1PQ3SYA9 428 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 KCNT1Q5JUK3 1230 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 LEKR1Q6ZMV7 388 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 CNGA4Q8IV77 575 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 FAM174AQ8TBP5 190 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 SAP25Q8TEE9 199 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 CTNNBL1Q8WYA6 563 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 KCTD15Q96SI1 283 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 NHEJ1Q9H9Q4 299 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 EBF2Q9HAK2 575 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 CTTNBP2NLQ9P2B4 639 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 SARDHQ9UL12 918 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
CCHCR1-211ENST00000467553 CXorf51AA0A1B0GTR3 108 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 WASH4PA8MWX3 477 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 KCNK3O14649 394 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 ENC1O14682 589 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 FGF10O15520 208 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 KDELR3O43731 214 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 WNT1P04628 370 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 H2AFZP0C0S5 128 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 PCK1P35558 622 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 HNF1BP35680 557 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 SERPINH1P50454 418 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 NXPH1P58417 271 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 STAT4Q14765 748 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 ASTE1Q2TB18 679 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 SETMARQ53H47 684 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 BOLA3Q53S33 107 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 C22orf39Q6P5X5 142 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 H2AFVQ71UI9 128 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 CHST14Q8NCH0 376 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 TMIEQ8NEW7 156 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 OR2A12Q8NGT7 310 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 PIP4K2CQ8TBX8 421 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 ZNF564Q8TBZ8 553 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 HSPH1Q92598 858 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 NOL6Q9H6R4 1146 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 NENFQ9UMX5 172 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 FCF1Q9Y324 198 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 GOLGA4Q13439 2230 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 CACNA1GO43497 2377 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 ADAMTS20P59510 1910 aa14.31□□□□□ -0.12
CCHCR1-211ENST00000467553 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 RASA4BC9J798 803 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms