RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 A0A088AWK7 358 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 F8W810 466 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CCNT1O60563 726 aaKnown RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CKMP06732 381 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 KRT5P13647 590 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CCDC130P13994 396 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 KCNJ2P63252 427 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 PLOD1Q02809 727 aaPredicted RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 PRICKLE4Q2TBC4 344 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 USH1GQ495M9 461 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 SHC4Q6S5L8 630 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 DIS3L2Q8IYB7 885 aaKnown RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF295-AS1Q8N0V1 137 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 ARHGAP18Q8N392 663 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 EIF1ADQ8N9N8 165 aaKnown RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 OR8K5Q8NH50 307 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 PIGBQ92521 554 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 VCXQ9H320 206 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 SH2D4AQ9H788 454 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 VCX3AQ9NNX9 186 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 RGPD1P0DJD0 1748 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 LOC100506127A0A0U1RQW1 187 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 HSPD1P10809 573 aaKnown RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 RGS19P49795 217 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 VAV2P52735 878 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 C1QBPQ07021 282 aaKnown RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 GALNT2Q10471 571 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 LSAMPQ13449 338 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 NFIXQ14938 502 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CYP4F22Q6NT55 531 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 FAM83HQ6ZRV2 1179 aaPredicted RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 LDHDQ86WU2 507 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 IRGQQ8WZA9 623 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 PTCHD1Q96NR3 888 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 NEU1Q99519 415 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 TWSG1Q9GZX9 223 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 PAQR5Q9NXK6 330 aaPredicted RBP7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 SNX12Q9UMY4 172 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 CASZ1Q86V15 1759 aa7.8□□□□□ -1.16
SPTBN1-204ENST00000467371 MYH1P12882 1939 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 FGFR2P21802 821 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 PTPN3P26045 913 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 GAD2Q05329 585 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 FAM153CQ494X1 144 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ARHGAP17Q68EM7 881 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 KIAA1161Q6NSJ0 714 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 HTR3DQ70Z44 454 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 TRPM8Q7Z2W7 1104 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 KANSL1Q7Z3B3 1105 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CSGALNACT2Q8N6G5 542 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 KBTBD3Q8NAB2 608 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CMASQ8NFW8 434 aaPredicted RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 OR6J1Q8NGC5 347 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CAGE1Q8TC20 777 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ENKURQ8TC29 256 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ATP8B4Q8TF62 1192 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF384Q8TF68 577 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 SHISA4Q96DD7 197 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CHMP6Q96FZ7 201 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 PGM2Q96G03 612 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 MSLNLQ96KJ4 702 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 RPRD1AQ96P16 312 aaPredicted RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 SEC31BQ9NQW1 1179 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 AGPAT5Q9NUQ2 364 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CNOT8Q9UFF9 292 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 TRAF6Q9Y4K3 522 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 PCDHA9Q9Y5H5 950 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 NWD1Q149M9 1564 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 SYNGAP1Q96PV0 1343 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF609O15014 1411 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 E7EWF7 191 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 FAM86B1E9PN63 330 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 HNRNPRO43390 633 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ATP2C2O75185 946 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ALOX5P09917 674 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 FDPSP14324 419 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 OAZ1P54368 228 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 TSPAN5P62079 268 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 RTP2Q5QGT7 225 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ANKRD40Q6AI12 368 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 TUBA3EQ6PEY2 450 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 TMCO2Q7Z6W1 182 aaPredicted RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 FJX1Q86VR8 437 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 IFT20Q8IY31 132 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ENDOVQ8N8Q3 282 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 STKLD1Q8NE28 680 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 PITHD1Q9GZP4 211 aaPredicted RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 ABHD16BQ9H3Z7 469 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 C12orf10Q9HB07 376 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 CENPMQ9NSP4 180 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 GPC6Q9Y625 555 aaPredicted RBP7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 USP54Q70EL1 1684 aa7.79□□□□□ -1.16
SPTBN1-204ENST00000467371 MAST3O60307 1309 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms