RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MYCP01106 439 aaPredicted RBP11.58□□□□□ -0.56
HPS1-208ENST00000467246 CSRP3P50461 194 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 NDST2P52849 883 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 GPR17Q13304 367 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 TUBB3Q13509 450 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 HNRNPDQ14103 355 aaKnown RBP11.58□□□□□ -0.56
HPS1-208ENST00000467246 SEPT6Q14141 434 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 RCN2Q14257 317 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 ZNF460Q14592 562 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
HPS1-208ENST00000467246 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 POTEHQ6S545 545 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 KDELC1Q6UW63 502 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 SLC41A1Q8IVJ1 513 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 SLC25A51Q9H1U9 297 aa11.58□□□□□ -0.56
HPS1-208ENST00000467246 TLR8Q9NR97 1041 aaKnown RBP11.58□□□□□ -0.56
HPS1-208ENST00000467246 NKX1-2Q9UD57 310 aaPredicted RBP11.58□□□□□ -0.56
HPS1-208ENST00000467246 IGLV3-10A0A075B6K4 115 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PRR5-ARHGAP8B1AHC4 643 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TK2O00142 265 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 CD86P42081 329 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 GLRBP48167 497 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 HARS2P49590 506 aaKnown RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 CDK7P50613 346 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 RENBPP51606 427 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 ARHGAP8P85298 464 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 DSC2Q02487 901 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 KDSRQ06136 332 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 MARC1Q5VT66 337 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PRSS55Q6UWB4 352 aaPredicted RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 FAM126BQ8IXS8 530 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PNPLA1Q8N8W4 532 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 ATP6V0D2Q8N8Y2 350 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TTC8Q8TAM2 541 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PPP4R1Q8TF05 950 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 BCL7CQ8WUZ0 217 aaPredicted RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 CCDC106Q9BWC9 280 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 C1QTNF1Q9BXJ1 281 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TASP1Q9H6P5 420 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TREX1Q9NSU2 369 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TLK1Q9UKI8 766 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 LRFN2Q9ULH4 789 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PHF24Q9UPV7 400 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PLXNA3P51805 1871 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TBC1D4O60343 1298 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 PEX11AO75192 247 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 GALTP07902 379 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 SERPINA6P08185 405 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 SLC35E2BP0CK96 405 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 SLC1A2P43004 574 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 CEP97Q8IW35 865 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 SPATA6LQ8N4H0 392 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 TMEM151AQ8N4L1 468 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 KCTD4Q8WVF5 259 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 IMP4Q96G21 291 aaKnown RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 RPRD1AQ96P16 312 aaPredicted RBP11.57□□□□□ -0.56
HPS1-208ENST00000467246 SP110Q9HB58 689 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 NSMCE4AQ9NXX6 385 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 FNIP2Q9P278 1114 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 ZNF212Q9UDV6 495 aa11.57□□□□□ -0.56
HPS1-208ENST00000467246 B2RBV5 119 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ZNF195O14628 629 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 AURKAO14965 403 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ADAM12O43184 909 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 GJB3O75712 270 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 WFS1O76024 890 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 MMP2P08253 660 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SBK3P0C264 359 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ETFBP38117 255 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 IDH3AP50213 366 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 USP4Q13107 963 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ZNF470Q6ECI4 717 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 TEX9Q8N6V9 391 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ZNF781Q8N8C0 355 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SPPL2BQ8TCT7 592 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ZNF483Q8TF39 744 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 ZNF570Q96NI8 536 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 UNKQ9C0B0 810 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 RUVBL2Q9Y230 463 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 MYLKQ15746 1914 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 TBKBP1A7MCY6 615 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 TLR5O60602 858 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 IGLV3-27P01718 113 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ATF6P18850 670 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ACVRL1P37023 503 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 KCNQ1P51787 676 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 BFSP2Q13515 415 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 CCDC117Q8IWD4 279 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 CENPLQ8N0S6 344 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 CRIPAKQ8N1N5 446 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 PGBD5Q8N414 524 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 AGR3Q8TD06 166 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 SCLYQ96I15 445 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms