RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 NUDCD1Q96RS6 583 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 TUBGCP5Q96RT8 1024 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 CPEB1Q9BZB8 566 aaKnown RBP15.41■□□□□ 0.06
NPHP4-205ENST00000466897 RSPH9Q9H1X1 276 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-205ENST00000466897 FEZ2Q9UHY8 353 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF148Q9UQR1 794 aa15.41■□□□□ 0.06
NPHP4-205ENST00000466897 MUSKO15146 869 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 GPR37L1O60883 481 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 GCATO75600 419 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 NEBLO76041 1014 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 POP4O95707 220 aaKnown RBP15.4■□□□□ 0.06
NPHP4-205ENST00000466897 COILP38432 576 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-205ENST00000466897 RAD51Q06609 339 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 MTAPQ13126 283 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 ITPRIPL1Q6GPH6 555 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 KIAA1211LQ6NV74 962 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 CCDC137Q6PK04 289 aaKnown RBP15.4■□□□□ 0.06
NPHP4-205ENST00000466897 TMEM92Q6UXU6 159 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 C4orf22Q6V702 233 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF567Q8N184 647 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 CAMKK1Q8N5S9 505 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 TMIEQ8NEW7 156 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 GRK7Q8WTQ7 553 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 VOPP1Q96AW1 172 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 PPP1R2P1Q96PQ5 205 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 FAM129BQ96TA1 746 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 OSBPL1AQ9BXW6 950 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 TM6SF2Q9BZW4 377 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 TNKS2Q9H2K2 1166 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 POLMQ9NP87 494 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-205ENST00000466897 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 SEPT10Q9P0V9 454 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 HECAQ9UBI9 543 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-205ENST00000466897 PCYOX1Q9UHG3 505 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 EML5Q05BV3 1969 aa15.4■□□□□ 0.06
NPHP4-205ENST00000466897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-205ENST00000466897 PRR33A8MZF0 331 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 PRNPP04156 253 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 COL9A1P20849 921 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 HOXA6P31267 233 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 WASP42768 502 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 RGRP47804 291 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 COPAP53621 1224 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 GDF10P55107 478 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 ZBTB16Q05516 673 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 SNX1Q13596 522 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 MYLK3Q32MK0 819 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 ANKRD20A2Q5SQ80 823 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 ANKRD20A1Q5TYW2 823 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 ANKRD20A3Q5VUR7 823 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 TTC27Q6P3X3 843 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 B4GALNT4Q76KP1 1039 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 SRLQ86TD4 932 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 KLHDC8BQ8IXV7 354 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 TMEM105Q8N8V8 129 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 FAM71DQ8N9W8 422 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 SPATA4Q8NEY3 305 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 ARRDC2Q8TBH0 407 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 TADA1Q96BN2 335 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 IMP4Q96G21 291 aaKnown RBP15.39■□□□□ 0.05
NPHP4-205ENST00000466897 AGAP3Q96P47 875 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 FCRL5Q96RD9 977 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 HEPHQ9BQS7 1158 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 SLC25A51Q9H1U9 297 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 GBA3Q9H227 469 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 C10orf88Q9H8K7 445 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 GLOD4Q9HC38 313 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 PRMT8Q9NR22 394 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-205ENST00000466897 KLHL8Q9P2G9 620 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-205ENST00000466897 IL36AQ9UHA7 158 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 PPM1HQ9ULR3 514 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 SCML1Q9UN30 329 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 WASF2Q9Y6W5 498 aa15.39■□□□□ 0.05
NPHP4-205ENST00000466897 INSIG1O15503 277 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ZBTB24O43167 697 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 RNASEH1O60930 286 aaKnown RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 SOCS5O75159 536 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 CD68P34810 354 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ACTN2P35609 894 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 CXCL12P48061 93 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 NUBP1P53384 320 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ATXN7L2Q5T6C5 722 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ZNF776Q68DI1 518 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 NCEH1Q6PIU2 408 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 PID1Q7Z2X4 250 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 RASSF3Q86WH2 238 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 STK40Q8N2I9 435 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 HCAR2Q8TDS4 363 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 EXOC2Q96KP1 924 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ZNF641Q96N77 438 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-205ENST00000466897 SEMA3CQ99985 751 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 MTG2Q9H4K7 406 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 ATP13A3Q9H7F0 1226 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 PCDH9Q9HC56 1237 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 VPS45Q9NRW7 570 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms