RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GDPD5Q8WTR4 605 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 RSRC1Q96IZ7 334 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 ZNF333Q96JL9 665 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 SORCS2Q96PQ0 1159 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 SDF4Q9BRK5 362 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 WDR83Q9BRX9 315 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 ITPAQ9BY32 194 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 CCDC68Q9H2F9 335 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 R3HDMLQ9H3Y0 253 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 SYNCQ9H7C4 482 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 SNTG1Q9NSN8 517 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 TMEM45AQ9NWC5 275 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 CDH22Q9UJ99 828 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 A4GNTQ9UNA3 340 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 GPR34Q9UPC5 381 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 SLC45A1Q9Y2W3 748 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 ADGRF5Q8IZF2 1346 aa4.63□□□□□ -1.67
CDC42BPA-211ENST00000466538 A0A096LPK6 155 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 A0A1W2PRG0 241 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 WIPF3A6NGB9 483 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 EBAG9O00559 213 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 TP73O15350 636 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 GFPT2O94808 682 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SLPIP03973 132 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 EIF2S1P05198 315 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 CENPBP07199 599 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 HOXB5P09067 269 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 MYZAPP0CAP1 466 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 NFKBIAP25963 317 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 POU1F1P28069 291 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 ICAM3P32942 547 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 HOXD13P35453 343 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 OLR1P78380 273 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 ID2Q02363 134 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SLC18A2Q05940 514 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 TMEM115Q12893 351 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 VEPH1Q14D04 833 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 ME3Q16798 604 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 PAPD7Q5XG87 772 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 TXNDC8Q6A555 127 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 ZNF66Q6ZN08 573 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 MOB3CQ70IA8 216 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SERPINA11Q86U17 422 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 GPAT4Q86UL3 456 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 CCDC89Q8N998 374 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 DPF1Q92782 380 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 ARHGEF2Q92974 986 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SMARCE1Q969G3 411 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 PIP5K1AQ99755 562 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SCNM1Q9BWG6 230 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 STRA6Q9BX79 667 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 GHITMQ9H3K2 345 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SPAG4Q9NPE6 437 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 PNRC2Q9NPJ4 139 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 PDGFCQ9NRA1 345 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 KLHL13Q9P2N7 655 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SEL1LQ9UBV2 794 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 LIMA1Q9UHB6 759 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SLCO3A1Q9UIG8 710 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 HAO1Q9UJM8 370 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 RABGAP1Q9Y3P9 1069 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 KCNE2Q9Y6J6 123 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 UTYO14607 1347 aa4.62□□□□□ -1.67
CDC42BPA-211ENST00000466538 SMIM35A0A1B0GVV1 85 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 A6NCN8 305 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 LIPT2A6NK58 231 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 TLX3O43711 291 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 TLR2O60603 784 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 TOP3BO95985 862 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 PCNAP12004 261 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 UNGP13051 313 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 ENO3P13929 434 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 MAPK4P31152 587 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 RYKP34925 604 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 GNAQP50148 359 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 PRAMEP78395 509 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 GOLGA8DPQ0D2H9 430 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 KCTD2Q14681 263 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 DPCR1Q3MIW9 517 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 PIK3CD-AS1Q5SR53 167 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 NCEH1Q6PIU2 408 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 SARM1Q6SZW1 724 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 IKBIPQ70UQ0 350 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 CNTROBQ8N137 903 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 PDILTQ8N807 584 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 MCPH1Q8NEM0 835 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 CADM4Q8NFZ8 388 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 POMGNT1Q8WZA1 660 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 INTS12Q96CB8 462 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 NSUN4Q96CB9 384 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 NEUROD6Q96NK8 337 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 TASP1Q9H6P5 420 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 SPATS2LQ9NUQ6 558 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 SEPT11Q9NVA2 429 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 HAUS2Q9NVX0 235 aa4.61□□□□□ -1.67
CDC42BPA-211ENST00000466538 TTLL3Q9Y4R7 772 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms