RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MBD3L4A6NDZ8 208 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 MBD3L3A6NE82 208 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 PRSS47A8MTI9 375 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 ACKR2O00590 384 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PODXLO00592 558 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NFIBO00712 420 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PEX10O60683 326 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FAM155BO75949 473 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 C1QL1O75973 258 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NOL4O94818 638 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 TMEM63AO94886 807 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 INMTO95050 263 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MOCS3O95396 460 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 GGPS1O95749 300 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MPIG6BO95866 241 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PGK1P00558 417 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CYBBP04839 570 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CELA3BP08861 270 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LTA4HP09960 611 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 TPBGLP0DKB5 382 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 RARBP10826 455 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 HARSP12081 509 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 RARGP13631 454 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FLT1P17948 1338 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CST5P28325 142 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 CTNNA1P35221 906 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 ARL4AP40617 200 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MTORP42345 2549 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MSH2P43246 934 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 AFMP43652 599 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NOVP48745 357 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PEX5P50542 639 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 WNT3AP56704 352 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PTENP60484 403 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MAGOHP61326 146 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 SPTBN1Q01082 2364 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 MVKQ03426 396 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 TLE1Q04724 770 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KLRC3Q07444 240 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MYO1EQ12965 1108 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MTA1Q13330 715 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 DHX34Q14147 1143 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 SPARCL1Q14515 664 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NAA25Q14CX7 972 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 WTAPQ15007 396 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 RPS6KA1Q15418 735 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PPP1R7Q15435 360 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NFIL3Q16649 462 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 DGKDQ16760 1214 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PFKFB3Q16875 520 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 MST1LQ2TV78 715 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KRTAP21-3Q3LHN1 58 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LRRC24Q50LG9 513 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 UBXN11Q5T124 520 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 DAB2IPQ5VWQ8 1189 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CD276Q5ZPR3 534 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KCTD16Q68DU8 428 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 ANKRD40Q6AI12 368 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KLHL10Q6JEL2 608 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FAM180BQ6P0A1 224 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NFRKBQ6P4R8 1299 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LRRC55Q6ZSA7 311 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LCNL1Q6ZST4 164 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 IRF2BP2Q7Z5L9 587 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MILR1Q7Z6M3 343 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 TBC1D1Q86TI0 1168 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 MIB1Q86YT6 1006 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LRRC56Q8IYG6 542 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 UNC5BQ8IZJ1 945 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 SYCE1Q8N0S2 351 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LILRA2Q8N149 483 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CSGALNACT2Q8N6G5 542 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PDZD8Q8NEN9 1154 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 KLHDC9Q8NEP7 349 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 OR6B3Q8NGW1 331 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FAM81AQ8TBF8 368 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 SHROOM3Q8TF72 1996 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FAM151AQ8WW52 585 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CKAP2Q8WWK9 683 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 ZCCHC14Q8WYQ9 949 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 KAT5Q92993 513 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MAGOHBQ96A72 148 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 TSPAN17Q96FV3 270 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CLPTM1LQ96KA5 538 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CAPZA3Q96KX2 299 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 MRGPRX1Q96LB2 322 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CNOT6LQ96LI5 555 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 SERPINB12Q96P63 405 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 NR1H4Q96RI1 486 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 EIF2AK1Q9BQI3 630 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 GORASP1Q9BQQ3 440 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 ERP44Q9BS26 406 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 SYT11Q9BT88 431 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 TUBB6Q9BUF5 446 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 TIPINQ9BVW5 301 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 PHF7Q9BWX1 381 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 NSRP1Q9H0G5 558 aaKnown RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 OR10A5Q9H207 317 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 CARD9Q9H257 536 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms