RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PSMB4P28070 264 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 NTSR1P30989 418 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 DSC2Q02487 901 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 GAS6Q14393 721 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 UBXN2BQ14CS0 331 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 E2F5Q15329 346 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 SLC14A2Q15849 920 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 HSF5Q4G112 596 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 C2orf27AQ580R0 203 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 ATXN7L2Q5T6C5 722 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 C9orf64Q5T6V5 341 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 CWF19L1Q69YN2 538 aaKnown RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 SYDE1Q6ZW31 735 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 SYNPOQ8N3V7 929 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 PJA1Q8NG27 643 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 CLDN23Q96B33 292 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 IMP4Q96G21 291 aaKnown RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 OXNAD1Q96HP4 312 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 FCRL5Q96RD9 977 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 NUDCD1Q96RS6 583 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 NELL2Q99435 816 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 SLC25A51Q9H1U9 297 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 PAK5Q9P286 719 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 KLHL8Q9P2G9 620 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 FEZ2Q9UHY8 353 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 SCN8AQ9UQD0 1980 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 PLXND1Q9Y4D7 1925 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 EML5Q05BV3 1969 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 A0A1W2PQF6 199 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 FAM170BA6NMN3 283 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 SIN3BO75182 1162 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 KLF8O95600 359 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 IGSF6O95976 241 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 COL9A1P20849 921 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 NNMTP40261 264 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 MAGEA6P43360 314 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 CCNHP51946 323 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 AP1S1P61966 158 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 SNRPD1P62314 119 aaKnown RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 SKOR1P84550 965 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 LRRC32Q14392 662 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TRIP13Q15645 432 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 RALGPS1Q5JS13 557 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 NCEH1Q6PIU2 408 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 KDELC1Q6UW63 502 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 DPY19L3Q6ZPD9 716 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 ARHGEF18Q6ZSZ5 1173 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 GSTA5Q7RTV2 222 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TRMT11Q7Z4G4 463 aaKnown RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 SRLQ86TD4 932 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 PRPF39Q86UA1 669 aaKnown RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 CHPFQ8IZ52 775 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TXNDC5Q8NBS9 432 aaKnown RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 CHST14Q8NCH0 376 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 RPLP0P6Q8NHW5 317 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 CCDC26Q8TAB7 109 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 GDAP1L1Q96MZ0 367 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 SEMA3CQ99985 751 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 MLPHQ9BV36 600 aaPredicted RBP11.29□□□□□ -0.6
VCP-204ENST00000466100 LMAN1LQ9HAT1 526 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 PRSS16Q9NQE7 514 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 MMP17Q9ULZ9 603 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 TTLL3Q9Y4R7 772 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 LRRK1Q38SD2 2015 aa11.29□□□□□ -0.6
VCP-204ENST00000466100 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 ALOX15BO15296 676 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 TP73O15350 636 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 EPHX1P07099 455 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 CTSLP07711 333 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 CES1P23141 567 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 GKP32189 559 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 WASP42768 502 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 RPS9P46781 194 aaKnown RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 SCNN1BP51168 640 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 ELAVL3Q14576 367 aaKnown RBP11.28□□□□□ -0.6
VCP-204ENST00000466100 NUMA1Q14980 2115 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
VCP-204ENST00000466100 PARP6Q2NL67 630 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms