RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ETNK2Q9NVF9 386 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 SMARCAL1Q9NZC9 954 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 KLHL8Q9P2G9 620 aaPredicted RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 SAE1Q9UBE0 346 aaPredicted RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 UBA2Q9UBT2 640 aaPredicted RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 PRKAG3Q9UGI9 489 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 DMGDHQ9UI17 866 aaKnown RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 XPO7Q9UIA9 1087 aaKnown RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 SLC25A13Q9UJS0 675 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 ANAPC5Q9UJX4 755 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 VPS28Q9UK41 221 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 R3HDM2Q9Y2K5 976 aaKnown RBP6.12□□□□□ -1.43
CHMP3-206ENST00000466032 NEU2Q9Y3R4 380 aa6.12□□□□□ -1.43
CHMP3-206ENST00000466032 MYO7AQ13402 2215 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 MYO9BQ13459 2157 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 DOCK4Q8N1I0 1966 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 HELZP42694 1942 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ATXN2Q99700 1313 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 GOLGA6L7A0A1B0GV03 622 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ANHXE9PGG2 379 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RNF103O00237 685 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LINC01565O15544 149 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 SPAG6O75602 509 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CNTN5O94779 1100 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PRAMEF12O95522 483 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 SERPINF2P08697 491 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PABPC1P11940 636 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 TYRP14679 529 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 POLR2EP19388 210 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PTPN3P26045 913 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 IVDP26440 423 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RPL22P35268 128 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 MMP13P45452 471 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LMAN1P49257 510 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ST8SIA6P61647 398 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 AP1S1P61966 158 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 SNRPD1P62314 119 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 BASP1P80723 227 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ZXDBP98169 803 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CCDC15Q0P6D6 951 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RUNX3Q13761 415 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ADGRE1Q14246 886 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LLGL1Q15334 1064 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 DHCR24Q15392 516 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ELF2Q15723 593 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 EML3Q32P44 896 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PLEKHG6Q3KR16 790 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ITPRIPL2Q3MIP1 535 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LEXMQ3ZCV2 418 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CFAP58Q5T655 872 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 IZUMO3Q5VZ72 239 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RNF219Q5W0B1 726 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CXorf57Q6NSI4 855 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 HIBCHQ6NVY1 386 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RHBDF2Q6PJF5 856 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 NPNTQ6UXI9 565 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CENPUQ71F23 418 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 TRMT10CQ7L0Y3 403 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 KIAA0907Q7Z7F0 614 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 KLHDC8BQ8IXV7 354 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 NDUFAF2Q8N183 169 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CARNMT1Q8N4J0 409 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ZCCHC9Q8N567 271 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PCDH20Q8N6Y1 951 aaKnown RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 NPWQ8N729 165 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CSGALNACT1Q8TDX6 532 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ING5Q8WYH8 240 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CAVIN3Q969G5 261 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 TTC17Q96AE7 1141 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 HMCESQ96FZ2 354 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LRIG1Q96JA1 1093 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PRICKLE1Q96MT3 831 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 LGMNQ99538 433 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 C19orf43Q9BQ61 176 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CINPQ9BW66 212 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ECT2Q9H8V3 914 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 VIPAS39Q9H9C1 493 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RAB6BQ9NRW1 208 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RBM22Q9NW64 420 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 DEC1Q9P2X7 70 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 FAM153AQ9UHL3 310 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 PLA2G4CQ9UP65 541 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 CCL26Q9Y258 94 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 HS3ST2Q9Y278 367 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
CHMP3-206ENST00000466032 USP15Q9Y4E8 981 aaPredicted RBP6.11□□□□□ -1.43
CHMP3-206ENST00000466032 RANBP2P49792 3224 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NOTCH4Q99466 2003 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CBX4O00257 560 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 MBTPS2O43462 519 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TSPAN3O60637 253 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SUN1O94901 812 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 AP2A1O95782 977 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TTC4O95801 387 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 GSRP00390 522 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms