RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SLC26A9Q7LBE3 791 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 TFAP2DQ7Z6R9 452 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 SETD3Q86TU7 594 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 ZSCAN30Q86W11 494 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 PASD1Q8IV76 773 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 EXD3Q8N9H8 876 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 OR7D4Q8NG98 312 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 WDR36Q8NI36 951 aaKnown RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 LMX1AQ8TE12 382 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 SMARCE1Q969G3 411 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 PPP1R13BQ96KQ4 1090 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 LENG8Q96PV6 779 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 LRRC61Q9BV99 259 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 C1QTNF2Q9BXJ5 285 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 TCEAL2Q9H3H9 227 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 UBE2TQ9NPD8 197 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 ARHGEF38Q9NXL2 777 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 ATXN7L1Q9ULK2 861 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 IGLV3-10A0A075B6K4 115 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 DRGXA6NNA5 263 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 M0QYT0 321 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 EFSO43281 561 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 GCATO75600 419 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ENDOD1O94919 500 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 TNFSF15O95150 251 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 AFPP02771 609 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 L1CAMP32004 1257 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 NOS2P35228 1153 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 RECQLP46063 649 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 CXCR3P49682 368 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 SERPINH1P50454 418 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 CCNHP51946 323 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ARF5P84085 180 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 STIM1Q13586 685 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 BRMS1LQ5PSV4 323 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 C6orf132Q5T0Z8 1188 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 KLHL10Q6JEL2 608 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 FOXR1Q6PIV2 292 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 PRICKLE2Q7Z3G6 844 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ARL14Q8N4G2 192 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 PCDH20Q8N6Y1 951 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ZNF397Q8NF99 534 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 NAT6Q93015 286 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 VOPP1Q96AW1 172 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 LIN37Q96GY3 246 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 TBATAQ96M53 351 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 CCNL2Q96S94 520 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 NPY6RQ99463 290 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 TRIM4Q9C037 500 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 CEP44Q9C0F1 390 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 TKTL2Q9H0I9 626 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 TMPRSS4Q9NRS4 437 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 MPP6Q9NZW5 540 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 APOBEC3BQ9UH17 382 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ITM2BQ9Y287 266 aa11.99□□□□□ -0.49
CNOT4-208ENST00000465721 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
CNOT4-208ENST00000465721 IGLON5A6NGN9 336 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-208ENST00000465721 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
CNOT4-208ENST00000465721 FPGTO14772 594 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 BMP6P22004 513 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 IGFALSP35858 605 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 CSRP3P50461 194 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 LINC00303Q3SY05 128 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 ISM2Q6H9L7 571 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 TRIM65Q6PJ69 517 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 ENOSF1Q7L5Y1 443 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 B3GNT8Q7Z7M8 397 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 PHACTR4Q8IZ21 702 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 WDR48Q8TAF3 677 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 BTN2A2Q8WVV5 523 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 NT5C3BQ969T7 300 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 FEM1CQ96JP0 617 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 IL12RB2Q99665 862 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 CCDC3Q9BQI4 270 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 HEPHQ9BQS7 1158 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 CLPBQ9H078 707 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 SPASTQ9UBP0 616 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 IPO11Q9UI26 975 aaKnown RBP11.98□□□□□ -0.49
CNOT4-208ENST00000465721 MAN1B1Q9UKM7 699 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 PCDHGA7Q9Y5G6 932 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.98□□□□□ -0.49
CNOT4-208ENST00000465721 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
CNOT4-208ENST00000465721 ILVBLA1L0T0 632 aa11.97□□□□□ -0.49
CNOT4-208ENST00000465721 LMO7DNF2Z398 122 aa11.97□□□□□ -0.49
CNOT4-208ENST00000465721 TSPAN6O43657 245 aa11.97□□□□□ -0.49
CNOT4-208ENST00000465721 CD160O95971 181 aa11.97□□□□□ -0.49
CNOT4-208ENST00000465721 CELA2BP08218 269 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms