RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 C9orf57Q5W0N0 161 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CDHR3Q6ZTQ4 885 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ZC3H3Q8IXZ2 948 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 DSELQ8IZU8 1212 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 LGI2Q8N0V4 545 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TMCO5AQ8N6Q1 288 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 MAGEC3Q8TD91 643 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ACMSDQ8TDX5 336 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 DNAJC1Q96KC8 554 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 TINF2Q9BSI4 451 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TM6SF2Q9BZW4 377 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 SYTL2Q9HCH5 934 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ZFP14Q9HCL3 533 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ATP13A1Q9HD20 1204 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 MORF4L1Q9UBU8 362 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 BIRC5O15392 142 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 HNRNPRO43390 633 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 RHOCP08134 193 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 NNMTP40261 264 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PIK3CGP48736 1102 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLC11A2P49281 568 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 PSEN1P49768 467 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 NRG1Q02297 640 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 SOWAHAQ2M3V2 549 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLC25A52Q3SY17 297 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TRIM60Q495X7 471 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 LIPMQ5VYY2 423 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ESRP1Q6NXG1 681 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 C11orf96Q7Z7L8 435 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ZNF410Q86VK4 478 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 DHRSXQ8N5I4 330 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 FAM47BQ8NA70 645 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TSPAN14Q8NG11 270 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 MYLPFQ96A32 169 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 GLT1D1Q96MS3 346 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 VTA1Q9NP79 307 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TBC1D13Q9NVG8 400 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLC27A5Q9Y2P5 690 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 LRRC37A3O60309 1634 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SNRPB2P08579 225 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 PSMB9P28065 219 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 NMBRP28336 390 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SOAT1P35610 550 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 RHOAP61586 193 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 IRF9Q00978 393 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 CDC16Q13042 620 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 FRG1Q14331 258 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 GALNT3Q14435 633 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TIGD2Q4W5G0 525 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TAS1R3Q7RTX0 852 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 FAM35AQ86V20 835 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TTC30AQ86WT1 665 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ATG16L2Q8NAA4 619 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 C7orf26Q96N11 449 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 HGH1Q9BTY7 390 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 TAS2R13Q9NYV9 303 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 UXTQ9UBK9 157 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 SORCS3Q9UPU3 1222 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 MYBPHLA2RUH7 354 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 RGS5O15539 181 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 LTA4HP09960 611 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 HLA-DPA1P20036 260 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 MRPS15P82914 257 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SYPL2Q5VXT5 272 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ANO7Q6IWH7 933 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ZFP1Q6P2D0 407 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 IL27RAQ6UWB1 636 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SLC22A9Q8IVM8 553 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 CFAP52Q8N1V2 620 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 CMASQ8NFW8 434 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 RAET1EQ8TD07 263 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 RBBP8Q99708 897 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
HPS4-208ENST00000464362 ZNHIT2Q9UHR6 403 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 POMPQ9Y244 141 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 FAM32AQ9Y421 112 aaKnown RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 TIMM22Q9Y584 194 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 MYH7BA7E2Y1 1941 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 CCDC154A6NI56 674 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 YJEFN3A6XGL0 299 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 TREHO43280 583 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 HS6ST1O60243 411 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 LRIG2O94898 1065 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ABCB1P08183 1280 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 MYL4P12829 197 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 UQCRBP14927 111 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 NR4A1P22736 598 aa9.17□□□□□ -0.94
HPS4-208ENST00000464362 ATN1P54259 1190 aaPredicted RBP9.17□□□□□ -0.94
HPS4-208ENST00000464362 ADARP55265 1226 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms