RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MAFFQ9ULX9 164 aa22.02■■□□□ 1.12
PDLIM2-216ENST00000464275 TRIM43BA6NCK2 446 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 PRRG1O14668 218 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 ACVRL1P37023 503 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 CD86P42081 329 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 E2F5Q15329 346 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 TMCO4Q5TGY1 634 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 ATG16L1Q676U5 607 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 RFWD3Q6PCD5 774 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 NUDCD3Q8IVD9 361 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 CFAP52Q8N1V2 620 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 AGAP11Q8TF27 550 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 TRIM43Q96BQ3 446 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 ZNF778Q96MU6 729 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 ZNF599Q96NL3 588 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 PRKD2Q9BZL6 878 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 SIRPGQ9P1W8 387 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 STC2O76061 302 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 BPGMP07738 259 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 MMP2P08253 660 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 RAG1P15918 1043 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 MAXP61244 160 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 DSC2Q02487 901 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 TWF1Q12792 350 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 PCSK7Q16549 785 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 FSTL4Q6MZW2 842 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 DENND1CQ8IV53 801 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 GPR65Q8IYL9 337 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 TCEAL8Q8IYN2 117 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 KIF2BQ8N4N8 673 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 TMEM199Q8N511 208 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 CFAP61Q8NHU2 1237 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 E2F7Q96AV8 911 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 THOC1Q96FV9 657 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 MCMBPQ9BTE3 642 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 SNX15Q9NRS6 342 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 LNPEPQ9UIQ6 1025 aa22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 ZFP37Q9Y6Q3 630 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-216ENST00000464275 BAIAP3O94812 1187 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 MPOP05164 745 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 PPM1AP35813 382 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 HADHAP40939 763 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 TADA1Q96BN2 335 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 RSRC1Q96IZ7 334 aaKnown RBP22■■□□□ 1.11
PDLIM2-216ENST00000464275 RANBP9Q96S59 729 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 KLF16Q9BXK1 252 aaPredicted RBP22■■□□□ 1.11
PDLIM2-216ENST00000464275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22■■□□□ 1.11
PDLIM2-216ENST00000464275 MRPL17Q9NRX2 175 aaKnown RBP22■■□□□ 1.11
PDLIM2-216ENST00000464275 ANKRD36A6QL64 1941 aa22■■□□□ 1.11
PDLIM2-216ENST00000464275 PAMP19021 973 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CORO1AP31146 461 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 EPHB3P54753 998 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 N4BP2L1Q5TBK1 243 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 NLRP9Q7RTR0 991 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CNTN4Q8IWV2 1026 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 PGBD5Q8N414 524 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 ARRDC2Q8TBH0 407 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 TRIM55Q9BYV6 548 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 ATXN3LQ9H3M9 355 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 PDFQ9HBH1 243 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 NPHS2Q9NP85 383 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 C15orf41Q9Y2V0 281 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CCDC78A2IDD5 438 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CLDN11O75508 207 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CHRNA4P43681 627 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 SERPINH1P50454 418 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CCNG1P51959 295 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 CREMQ03060 361 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 GNA12Q03113 381 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 ESRP1Q6NXG1 681 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 KDELC2Q7Z4H8 507 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 DNAJB7Q7Z6W7 309 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 SLC25A41Q8N5S1 370 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 YME1L1Q96TA2 773 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 DDX50Q9BQ39 737 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 MECRQ9BV79 373 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 POLR1EQ9GZS1 481 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 GKN1Q9NS71 199 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 TREX1Q9NSU2 369 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 STK39Q9UEW8 545 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 EMCNQ9ULC0 261 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 STK38LQ9Y2H1 464 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 MTO1Q9Y2Z2 717 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 INSL5Q9Y5Q6 135 aa21.99■■□□□ 1.11
PDLIM2-216ENST00000464275 HEATR9A2RTY3 570 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 TOP3BO95985 862 aaKnown RBP21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 KLKB1P03952 638 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 ETFBP38117 255 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 ZNF235Q14590 738 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 UGP2Q16851 508 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 KIAA0930Q6ICG6 404 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 TLDC1Q6P9B6 456 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 CHST9Q7L1S5 443 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 AUTS2Q8WXX7 1259 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 VPS39Q96JC1 886 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 RNF38Q9H0F5 515 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 ZFP69BQ9UJL9 534 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 H3BNC9 293 aa21.98■■□□□ 1.11
PDLIM2-216ENST00000464275 PLIN3O60664 434 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms