RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PDFQ9HBH1 243 aa21.22■□□□□ 0.99
CD58-204ENST00000464088 PRSS16Q9NQE7 514 aa21.22■□□□□ 0.99
CD58-204ENST00000464088 AMFRQ9UKV5 643 aa21.22■□□□□ 0.99
CD58-204ENST00000464088 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.22■□□□□ 0.99
CD58-204ENST00000464088 SMG1Q96Q15 3661 aaKnown RBP21.22■□□□□ 0.99
CD58-204ENST00000464088 IGSF10Q6WRI0 2623 aa21.22■□□□□ 0.99
CD58-204ENST00000464088 TCRBV21S2A2A0A5A6 115 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 CCDC66A2RUB6 948 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 ARHGAP42A6NI28 874 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 FTCDO95954 541 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 SERPINF2P08697 491 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 GABRG2P18507 467 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 NNMTP40261 264 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 CLCN6P51797 869 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 COPAP53621 1224 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 STARD3Q14849 445 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 DLG2Q15700 870 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 C9orf64Q5T6V5 341 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 SLC9A4Q6AI14 798 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 SPOCD1Q6ZMY3 1216 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 PEX26Q7Z412 305 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 REXO1L1PQ8IX06 675 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 EXD1Q8NHP7 514 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 ALG3Q92685 438 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 ERLEC1Q96DZ1 483 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 CAPN10Q9HC96 672 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 HPCAL4Q9UM19 191 aa21.21■□□□□ 0.99
CD58-204ENST00000464088 EDDM13A0A1B0GTR0 161 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 TARSL2A2RTX5 802 aaKnown RBP21.2■□□□□ 0.98
CD58-204ENST00000464088 ZSCAN5CA6NGD5 496 aaPredicted RBP21.2■□□□□ 0.98
CD58-204ENST00000464088 DDX3YO15523 660 aaKnown RBP21.2■□□□□ 0.98
CD58-204ENST00000464088 MFSD11O43934 449 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 SYNCRIPO60506 623 aaKnown RBP21.2■□□□□ 0.98
CD58-204ENST00000464088 PRAMEF11O60813 436 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 SIN3BO75182 1162 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 ZNF821O75541 412 aaPredicted RBP21.2■□□□□ 0.98
CD58-204ENST00000464088 ZRANB2O95218 330 aaKnown RBP eCLIP21.2■□□□□ 0.98
CD58-204ENST00000464088 VAV1P15498 845 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 ITPKAP23677 461 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 SERPINB6P35237 376 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 ARHGAP36Q6ZRI8 547 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 RCOR2Q8IZ40 523 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 PLD5Q8N7P1 536 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 ATP11CQ8NB49 1132 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 HES6Q96HZ4 224 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 PRDM16Q9HAZ2 1276 aa21.2■□□□□ 0.98
CD58-204ENST00000464088 PLXNB3Q9ULL4 1909 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 MIF4GDA9UHW6 222 aaKnown RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 J3KR12 359 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 DFFAO00273 331 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 OPHN1O60890 802 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 CFIP05156 583 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 CD59P13987 128 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 NDUFV2P19404 249 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 ATXN3P54252 364 aaPredicted RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 C22orf39Q6P5X5 142 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 RABEPKQ7Z6M1 372 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 PDZD3Q86UT5 571 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 OR2T3Q8NH03 318 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 RBM41Q96IZ5 413 aaKnown RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 MRGPRX1Q96LB2 322 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 CEP44Q9C0F1 390 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 MKRN2Q9H000 416 aaKnown RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 FBRSQ9HAH7 460 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 PYCARDQ9ULZ3 195 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 PACSIN2Q9UNF0 486 aaPredicted RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 ATXN2Q99700 1313 aaKnown RBP21.19■□□□□ 0.98
CD58-204ENST00000464088 SHROOM3Q8TF72 1996 aa21.19■□□□□ 0.98
CD58-204ENST00000464088 hCG_1818297A0A087WSY0 165 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 RWDD2BP57060 319 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 GEMIN4P57678 1058 aaKnown RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 GBE1Q04446 702 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 GALNT2Q10471 571 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 SLC10A2Q12908 348 aaPredicted RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 PPP2R5EQ16537 467 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 INO80DQ53TQ3 878 aaPredicted RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 ODF2Q5BJF6 829 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 TFDP3Q5H9I0 405 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 LEKR1Q6ZMV7 388 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 Q6ZVU0 165 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 ZNF354CQ86Y25 554 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 UBE2Q2Q8WVN8 375 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 HMGB4Q8WW32 186 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 FAM129BQ96TA1 746 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 GTPBP2Q9BX10 602 aaKnown RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 SLC6A17Q9H1V8 727 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 FSCN3Q9NQT6 498 aa21.18■□□□□ 0.98
CD58-204ENST00000464088 DNAAF2Q9NVR5 837 aaKnown RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 BCCIPQ9P287 314 aaKnown RBP eCLIP21.18■□□□□ 0.98
CD58-204ENST00000464088 IPO11Q9UI26 975 aaKnown RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 FCF1Q9Y324 198 aaKnown RBP21.18■□□□□ 0.98
CD58-204ENST00000464088 APOL1O14791 398 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 ZSCAN12O43309 604 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 MAFKO60675 156 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 KRT10P13645 584 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 COPS2P61201 443 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 IL10RBQ08334 325 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 ADCY2Q08462 1091 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 ACCSLQ4AC99 568 aa21.17■□□□□ 0.98
CD58-204ENST00000464088 C19orf48Q6RUI8 117 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms