RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CREB3O43889 395 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 POP4O95707 220 aaKnown RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 THEGLP0DJG4 465 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 DESP17661 470 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 GKP32189 559 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 SNRPD1P62314 119 aaKnown RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 RPS21P63220 83 aaKnown RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 MYLK3Q32MK0 819 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 CCDC157Q569K6 752 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 E4F1Q66K89 784 aaPredicted RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 PLEKHA7Q6IQ23 1121 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 KIAA1161Q6NSJ0 714 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 GALNT15Q8N3T1 639 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 OR2AP1Q8NGE2 309 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 FEM1CQ96JP0 617 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 CNDP2Q96KP4 475 aaKnown RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 HAUS4Q9H6D7 363 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 CATSPERBQ9H7T0 1116 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 KNTC1P50748 2209 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 GOLGA4Q13439 2230 aaKnown RBP19.26■□□□□ 0.67
VARS-220ENST00000461874 FREM2Q5SZK8 3169 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 DMXL2Q8TDJ6 3036 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 SRRM3A6NNA2 597 aaPredicted RBP19.25■□□□□ 0.67
VARS-220ENST00000461874 C16orf96A6NNT2 1141 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 KRIT1O00522 736 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 GZMAP12544 262 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 PRKCIP41743 596 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 YBEYP58557 167 aaPredicted RBP19.25■□□□□ 0.67
VARS-220ENST00000461874 FGL2Q14314 439 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 SMAD1Q15797 465 aaKnown RBP19.25■□□□□ 0.67
VARS-220ENST00000461874 ZNF805Q5CZA5 627 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 ABI3BPQ7Z7G0 1075 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 ZNF354CQ86Y25 554 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 UMODL1-AS1Q8N2C9 162 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 CASKIN2Q8WXE0 1202 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 RAB7BQ96AH8 199 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 HMCESQ96FZ2 354 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 SLC17A9Q9BYT1 436 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 EDEM3Q9BZQ6 932 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 TTYH3Q9C0H2 523 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 KLC2Q9H0B6 622 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 KLHL11Q9NVR0 708 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 PCDHGA1Q9Y5H4 931 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 HS3ST3A1Q9Y663 406 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 PKD1L2Q7Z442 2459 aa19.25■□□□□ 0.67
VARS-220ENST00000461874 ARID1BQ8NFD5 2236 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 RASA4BC9J798 803 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 FGF10O15520 208 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 ATMINO43313 823 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 RASA4O43374 803 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 TMCC1O94876 653 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 FTLP02792 175 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 PSMA2P25787 234 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 HTR7P34969 479 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 CLDN2P57739 230 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 MAPK8IP2Q13387 824 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 SERINC3Q13530 473 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 NR1I3Q14994 352 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 PARP15Q460N3 678 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 INO80DQ53TQ3 878 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 ATXN7L2Q5T6C5 722 aaPredicted RBP19.24■□□□□ 0.67
VARS-220ENST00000461874 DHRS13Q6UX07 377 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 GCNT7Q6ZNI0 430 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 ZSCAN30Q86W11 494 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 DNAAF5Q86Y56 855 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 OR13H1Q8NG92 308 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 FAM174AQ8TBP5 190 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 TSC1Q92574 1164 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 OSBPL1AQ9BXW6 950 aa19.24■□□□□ 0.67
VARS-220ENST00000461874 PLXNB3Q9ULL4 1909 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 COL5A1P20908 1838 aaPredicted RBP19.23■□□□□ 0.67
VARS-220ENST00000461874 TP53BP1Q12888 1972 aaPredicted RBP19.23■□□□□ 0.67
VARS-220ENST00000461874 TMEM191CA6NGB0 347 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 TAF4O00268 1085 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.67
VARS-220ENST00000461874 TSPAN6O43657 245 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 PAK4O96013 591 aaPredicted RBP19.23■□□□□ 0.67
VARS-220ENST00000461874 SERPINC1P01008 464 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 UGT2B4P06133 528 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 C1SP09871 688 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 ABL2P42684 1182 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 DNAJC3Q13217 504 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 MARCH9Q86YJ5 346 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 ARFGAP1Q8N6T3 406 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 BMFQ96LC9 184 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 GDAP1L1Q96MZ0 367 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 C1QTNF2Q9BXJ5 285 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 CALN1Q9BXU9 219 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 GPATCH2LQ9NWQ4 482 aa19.23■□□□□ 0.67
VARS-220ENST00000461874 ANKRD11Q6UB99 2663 aaPredicted RBP19.23■□□□□ 0.67
VARS-220ENST00000461874 TRPM6Q9BX84 2022 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 RAD51BO15315 384 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 SDC3O75056 442 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 CDK4P11802 303 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 ACADVLP49748 655 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 TPI1P60174 286 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 RAD51Q06609 339 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 KLHL30Q0D2K2 578 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 GDPD4Q6W3E5 623 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms