RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SLC1A6P48664 564 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 MNX1P50219 401 aaPredicted RBP20.48■□□□□ 0.87
CCM2-203ENST00000461377 TLE2Q04725 743 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 ZBTB16Q05516 673 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 RIPK1Q13546 671 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 IHHQ14623 411 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 SNCBQ16143 134 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 CNGA3Q16281 694 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 TRIM60Q495X7 471 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 FAM91A1Q658Y4 838 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 LGI2Q8N0V4 545 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 PGBD5Q8N414 524 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 ARRDC2Q8TBH0 407 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 TMEM237Q96Q45 408 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 LNPEPQ9UIQ6 1025 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 SLC39A10Q9ULF5 831 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 ANKRD6Q9Y2G4 727 aa20.48■□□□□ 0.87
CCM2-203ENST00000461377 MICAL3Q7RTP6 2002 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 COL4A6Q14031 1691 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 HNRNPCL1O60812 293 aaKnown RBP20.47■□□□□ 0.87
CCM2-203ENST00000461377 PRAMEF11O60813 436 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 MSLNQ13421 630 aaPredicted RBP20.47■□□□□ 0.87
CCM2-203ENST00000461377 SEPT6Q14141 434 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 CNKSR3Q6P9H4 555 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 SLC25A41Q8N5S1 370 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 OR6Y1Q8NGX8 325 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 CLSTN3Q9BQT9 956 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 WWP1Q9H0M0 922 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 MARCOQ9UEW3 520 aaPredicted RBP20.47■□□□□ 0.87
CCM2-203ENST00000461377 MYLKQ15746 1914 aa20.47■□□□□ 0.87
CCM2-203ENST00000461377 HEATR9A2RTY3 570 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 ZNF840PA6NDX5 716 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 LYPLA1O75608 230 aaPredicted RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 SEC24AO95486 1093 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 ATP6V1G2O95670 118 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 SLC6A4P31645 630 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 POLD2P49005 469 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 SERPINH1P50454 418 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 RASSF2P50749 326 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 MPP1Q00013 466 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 IKBKEQ14164 716 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 LBRQ14739 615 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 KLHDC10Q6PID8 442 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 DENND6AQ8IWF6 608 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCM2-203ENST00000461377 UTP4Q969X6 686 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 VWCEQ96DN2 955 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 PRR11Q96HE9 360 aaPredicted RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 ZNF512Q96ME7 567 aaPredicted RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 RAB3IPQ96QF0 476 aaPredicted RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 SIKE1Q9BRV8 207 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 TUBB6Q9BUF5 446 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 RETREG1Q9H6L5 497 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 FCHO1O14526 889 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 GJB5O95377 273 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 KITP10721 976 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 RALBP11234 206 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 HMGA1P17096 107 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 AQP5P55064 265 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 KRT72Q14CN4 511 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 TMCO4Q5TGY1 634 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 KIAA1841Q6NSI8 718 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 ALYREFQ86V81 257 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 C2CD4AQ8NCU7 369 aaPredicted RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 PTCD3Q96EY7 689 aaKnown RBP20.46■□□□□ 0.87
CCM2-203ENST00000461377 C1QTNF1Q9BXJ1 281 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 PDFQ9HBH1 243 aa20.46■□□□□ 0.87
CCM2-203ENST00000461377 G3V2L1 256 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 ABLIM3O94929 683 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 SLC1A2P43004 574 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 CTBP1Q13363 440 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 THOC5Q13769 683 aaKnown RBP20.45■□□□□ 0.86
CCM2-203ENST00000461377 USP10Q14694 798 aaKnown RBP20.45■□□□□ 0.86
CCM2-203ENST00000461377 HECTD3Q5T447 861 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 LCA5Q86VQ0 697 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 SORT1Q99523 831 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 NMRAL1Q9HBL8 299 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 ARL8BQ9NVJ2 186 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 TBX21Q9UL17 535 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 DNAJC16Q9Y2G8 782 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 COCHO43405 550 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 SOD2P04179 222 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
CCM2-203ENST00000461377 DNAJB1P25685 340 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 ETFBP38117 255 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 SLC11A2P49281 568 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 HARS2P49590 506 aaKnown RBP20.45■□□□□ 0.86
CCM2-203ENST00000461377 TSTD2Q5T7W7 516 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 RFWD3Q6PCD5 774 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 TTC7BQ86TV6 843 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 CFAP52Q8N1V2 620 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 ZNF461Q8TAF7 563 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 PIWIL2Q8TC59 973 aaKnown RBP20.45■□□□□ 0.86
CCM2-203ENST00000461377 ZNF599Q96NL3 588 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 NMUR2Q9GZQ4 415 aa20.45■□□□□ 0.86
CCM2-203ENST00000461377 TLK1Q9UKI8 766 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms