RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RPL34P49207 117 aaKnown RBP17.55■□□□□ 0.4
TOP3A-202ENST00000461127 EIF2B5Q13144 721 aaKnown RBP17.55■□□□□ 0.4
TOP3A-202ENST00000461127 PHACTR4Q8IZ21 702 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 PPM1KQ8N3J5 372 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 CHST14Q8NCH0 376 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 DENND6BQ8NEG7 585 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 PPP1R13BQ96KQ4 1090 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 FOXP3Q9BZS1 431 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 THAP9Q9H5L6 903 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 DDIT4Q9NX09 232 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 COX16Q9P0S2 106 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 GULP1Q9UBP9 304 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 FADS3Q9Y5Q0 445 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
TOP3A-202ENST00000461127 K7ERQ8 282 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 RNF225M0QZC1 329 aaPredicted RBP17.54■□□□□ 0.4
TOP3A-202ENST00000461127 CASC3O15234 703 aaKnown RBP17.54■□□□□ 0.4
TOP3A-202ENST00000461127 SLC16A3O15427 465 aaKnown RBP17.54■□□□□ 0.4
TOP3A-202ENST00000461127 SNAP91O60641 907 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 RHOCP08134 193 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 HGFP14210 728 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 ITGB7P26010 798 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 CCKBRP32239 447 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 GPD2P43304 727 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 CDH4P55283 916 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 MORC3Q14149 939 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 STX1AQ16623 288 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 FAXCQ5TGI0 409 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 C22orf39Q6P5X5 142 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 VASH2Q86V25 355 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 ARL10Q8N8L6 244 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 ZNF564Q8TBZ8 553 aaPredicted RBP17.54■□□□□ 0.4
TOP3A-202ENST00000461127 STK32AQ8WU08 396 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 LRRC61Q9BV99 259 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 VPS51Q9UID3 782 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 UNC79Q9P2D8 2635 aa17.54■□□□□ 0.4
TOP3A-202ENST00000461127 IGLON5A6NGN9 336 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 NEMP1O14524 444 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 YY2O15391 372 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 SMAD6O43541 496 aaKnown RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TSPAN6O43657 245 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 L1CAMP32004 1257 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 IRAK1P51617 712 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 PFN3P60673 137 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 PITX1P78337 314 aaPredicted RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TYRO3Q06418 890 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 EIF4EBP2Q13542 120 aaPredicted RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 C4orf17Q53FE4 359 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TPRG1LQ5T0D9 272 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 DPY19L3Q6ZPD9 716 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 PTRH1Q86Y79 214 aaKnown RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 SPATA20Q8TB22 786 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 CCDC74AQ96AQ1 378 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TMEM159Q96B96 161 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 KLF6Q99612 283 aaPredicted RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TSG101Q99816 390 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 C1QTNF2Q9BXJ5 285 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 CPEB1Q9BZB8 566 aaKnown RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 GTPBP4Q9BZE4 634 aaKnown RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TNKS2Q9H2K2 1166 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 TCEAL2Q9H3H9 227 aaPredicted RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 ANO10Q9NW15 660 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 ARMCX3Q9UH62 379 aaPredicted RBP17.53■□□□□ 0.4
TOP3A-202ENST00000461127 LOXL2Q9Y4K0 774 aa17.53■□□□□ 0.4
TOP3A-202ENST00000461127 RNF103O00237 685 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 CALCAP01258 141 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 RPLP0P05388 317 aaKnown RBP17.52■□□□□ 0.4
TOP3A-202ENST00000461127 TSHRP16473 764 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 CD82P27701 267 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 BLKP51451 505 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 CYP4F2P78329 520 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 CCL7P80098 99 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 CLCA4Q14CN2 919 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 ELOCQ15369 112 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 SDR16C5Q8N3Y7 309 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 FSTL5Q8N475 847 aaPredicted RBP17.52■□□□□ 0.4
TOP3A-202ENST00000461127 DCAF4L2Q8NA75 395 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 OR6C4Q8NGE1 309 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 ASB12Q8WXK4 309 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 PSMB7Q99436 277 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 HEPHQ9BQS7 1158 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 SLC4A5Q9BY07 1137 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 EPN3Q9H201 632 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 TSPY26PQ9H489 355 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 HS3ST4Q9Y661 456 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 WASF2Q9Y6W5 498 aa17.52■□□□□ 0.4
TOP3A-202ENST00000461127 UNC13CQ8NB66 2214 aa17.52■□□□□ 0.39
TOP3A-202ENST00000461127 PRAMEF33A0A0G2JMD5 474 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 E5RJQ4 531 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 PRAMEF10O60809 474 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 ENDOD1O94919 500 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 ALPIP09923 528 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 YPEL5P62699 121 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 PPARDQ03181 441 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 CETN1Q12798 172 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 BORAQ6PGQ7 559 aa17.51■□□□□ 0.39
TOP3A-202ENST00000461127 LVRNQ6Q4G3 990 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms