RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 SGSM2O43147 1006 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TSPAN3O60637 253 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 FSBPO95073 299 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TNFSF15O95150 251 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LTFP02788 710 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 GP1BAP07359 652 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 THEGLP0DJG4 465 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 PRF1P14222 555 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 KCNE1P15382 129 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 PRKCAP17252 672 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 PFKLP17858 780 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 RXRAP19793 462 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TYMPP19971 482 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LPOP22079 712 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ENPP1P22413 925 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 GDNFP39905 211 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ZNF132P52740 706 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 MLLT10P55197 1068 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 SCAND1P57086 179 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 GBX1Q14549 363 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 SHBQ15464 509 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 XKR4Q5GH76 650 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 MANEAQ5SRI9 462 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LY6G5CQ5SRR4 150 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 GRAMD4Q6IC98 578 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CASC1Q6TDU7 716 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ALKAL1Q6UXT8 129 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 DSTYKQ6XUX3 929 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 FAM124AQ86V42 546 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CXorf67Q86X51 503 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TMPRSS6Q8IU80 811 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TPH2Q8IWU9 490 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TRIM48Q8IWZ4 208 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LILRA2Q8N149 483 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 NUP43Q8NFH3 380 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 WDR36Q8NI36 951 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 C18orf25Q96B23 403 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ATXN7L3BQ96GX2 97 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC43Q96MW1 224 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ZMAT2Q96NC0 199 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LXNQ9BS40 222 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 POLR3FQ9H1D9 316 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 C2orf40Q9H1Z8 148 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 C6orf106Q9H6K1 298 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CASS4Q9NQ75 786 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ZNF71Q9NQZ8 489 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 DIAPH3Q9NSV4 1193 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TBC1D14Q9P2M4 693 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 NYNRINQ9P2P1 1898 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 MYOTQ9UBF9 498 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC39Q9UFE4 941 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ITGB1BP2Q9UKP3 347 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 TNRC6AQ8NDV7 1962 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 A0A1B0GVM2 712 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 A0A1W2PNU3 283 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 KLHL33A6NCF5 533 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 C2orf78A6NCI8 922 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA8AA7E2F4 631 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA8BA8MQT2 603 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ACOT7O00154 380 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 HOXC11O43248 304 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 NOBOXO60393 691 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 FAM155BO75949 473 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 MED26O95402 600 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 SEMA4FO95754 770 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 MYL1P05976 194 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 DBHP09172 617 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 PF4V1P10720 104 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 LIPCP11150 499 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ODC1P11926 461 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 PNLIPP16233 465 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 AGXTP21549 392 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 GNA11P29992 359 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 SLC6A4P31645 630 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 RXRGP48443 463 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 MANFP55145 182 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ANTXR2P58335 489 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ERVFRD-1P60508 538 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 OSTNP61366 133 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 CYP4F2P78329 520 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 KLRB1Q12918 225 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 SRSF6Q13247 344 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 TGIF1Q15583 401 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ANO4Q32M45 955 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 MINDY4Q4G0A6 757 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 ATF7IP2Q5U623 682 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 PGM2L1Q6PCE3 622 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 CWC27Q6UX04 472 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 SPNS3Q6ZMD2 512 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 RSRC2Q7L4I2 434 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 CACUL1Q86Y37 369 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 FANCBQ8NB91 859 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 STKLD1Q8NE28 680 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 OR10T2Q8NGX3 314 aa4.24□□□□□ -1.73
ECHDC1-211ENST00000460558 MAPK15Q8TD08 544 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms