RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 OSBPL9Q96SU4 736 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 BTBD1Q9H0C5 482 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 KLHL11Q9NVR0 708 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.91■□□□□ 0.14
SDF4-204ENST00000459994 OR51B4Q9Y5P0 310 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 ACACBO00763 2458 aa15.91■□□□□ 0.14
SDF4-204ENST00000459994 AKAP13Q12802 2813 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 A0A1B0GVT2 93 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 FGF10O15520 208 aaPredicted RBP15.9■□□□□ 0.14
SDF4-204ENST00000459994 CREB3O43889 395 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 SH3BP5O60239 455 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 FSBPO95073 299 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 IGHV4-34P06331 123 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 SYPP08247 313 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 GNSP15586 552 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 GOT1P17174 413 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 PSMD8P48556 350 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 CSNK1EP49674 416 aaKnown RBP15.9■□□□□ 0.14
SDF4-204ENST00000459994 PLK1P53350 603 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 TPI1P60174 286 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 SHC2P98077 582 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 DPYSQ14117 519 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 CST6Q15828 149 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 TFDP3Q5H9I0 405 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 RABGAP1LQ5R372 815 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 TTC39BQ5VTQ0 682 aaPredicted RBP15.9■□□□□ 0.14
SDF4-204ENST00000459994 RFX8Q6ZV50 586 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 ZNF557Q8N988 423 aaPredicted RBP15.9■□□□□ 0.14
SDF4-204ENST00000459994 FRS2Q8WU20 508 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 RNF157Q96PX1 679 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 PSMB7Q99436 277 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 NEUROG2Q9H2A3 272 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 FBRSQ9HAH7 460 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 FBXL12Q9NXK8 326 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 SUSD2Q9UGT4 822 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 FNDC3AQ9Y2H6 1198 aaKnown RBP15.9■□□□□ 0.14
SDF4-204ENST00000459994 SAR1BQ9Y6B6 198 aa15.9■□□□□ 0.14
SDF4-204ENST00000459994 hCG_1818297A0A087WSY0 165 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 EDDM13A0A1B0GTR0 161 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 FAM47DPA6NHR8 397 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 WASH4PA8MWX3 477 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 C10orf142B7Z368 130 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 RNF103O00237 685 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 SRGAP2O75044 1071 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 KRT37O76014 449 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 RHOQP17081 205 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 EPHB2P29323 1055 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 ZBTB16Q05516 673 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 ZNF211Q13398 564 aaPredicted RBP15.89■□□□□ 0.13
SDF4-204ENST00000459994 ANKRD20A8PQ5CZ79 823 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 SEL1L2Q5TEA6 688 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 CCDC117Q8IWD4 279 aaPredicted RBP15.89■□□□□ 0.13
SDF4-204ENST00000459994 HDDC3Q8N4P3 179 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 KDM1BQ8NB78 822 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 KIF18AQ8NI77 898 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 PCDH19Q8TAB3 1148 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 FEM1AQ9BSK4 669 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 OSBPL8Q9BZF1 889 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 ZYG11BQ9C0D3 744 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 CATSPERBQ9H7T0 1116 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 TM9SF3Q9HD45 589 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 MPP6Q9NZW5 540 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 SARDHQ9UL12 918 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 TTC7AQ9ULT0 858 aaPredicted RBP15.89■□□□□ 0.13
SDF4-204ENST00000459994 ASPMQ8IZT6 3477 aa15.89■□□□□ 0.13
SDF4-204ENST00000459994 TARSL2A2RTX5 802 aaKnown RBP15.88■□□□□ 0.13
SDF4-204ENST00000459994 UPK3BL1B0FP48 263 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 UPK3BL2E5RIL1 263 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 WNT9AO14904 365 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 DAPK3O43293 454 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 CEP104O60308 925 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 SNAP91O60641 907 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 MT-CO1P00395 513 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 GLDCP23378 1020 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 CXCR5P32302 372 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 SLC8A1P32418 973 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 DRD3P35462 400 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 TFDP2Q14188 446 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 TTC31Q49AM3 519 aaPredicted RBP15.88■□□□□ 0.13
SDF4-204ENST00000459994 RNF219Q5W0B1 726 aaPredicted RBP15.88■□□□□ 0.13
SDF4-204ENST00000459994 RWDD4Q6NW29 188 aaKnown RBP15.88■□□□□ 0.13
SDF4-204ENST00000459994 NCEH1Q6PIU2 408 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 PQLC3Q8N755 202 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 GANCQ8TET4 914 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 MAK16Q9BXY0 300 aaKnown RBP15.88■□□□□ 0.13
SDF4-204ENST00000459994 GAREM1Q9H706 876 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 SNX11Q9Y5W9 270 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 CABIN1Q9Y6J0 2220 aa15.88■□□□□ 0.13
SDF4-204ENST00000459994 A0A0D9SEW6 157 aa15.87■□□□□ 0.13
SDF4-204ENST00000459994 C1QTNF9BB2RNN3 333 aa15.87■□□□□ 0.13
SDF4-204ENST00000459994 K7ERQ8 282 aa15.87■□□□□ 0.13
SDF4-204ENST00000459994 HYAL3O43820 417 aaPredicted RBP15.87■□□□□ 0.13
SDF4-204ENST00000459994 CLDN11O75508 207 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms