RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 C4orf19Q8IY42 314 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CDK20Q8IZL9 346 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 TSPAN18Q96SJ8 248 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 DPY30Q9C005 99 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ARHGAP39Q9C0H5 1083 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 KCNMB3Q9NPA1 279 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PRDM5Q9NQX1 630 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 AGPAT3Q9NRZ7 376 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ARHGAP28Q9P2N2 729 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 DCXO43602 365 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PGK1P00558 417 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 IFNA16P05015 189 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SNRPB2P08579 225 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 ITGA2P17301 1181 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PAICSP22234 425 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 PPP2R1BP30154 601 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PSEN2P49810 448 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 TOB1P50616 345 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 SMIM11AP58511 58 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CSNK2BP67870 215 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 MFSD10Q14728 455 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ACAP2Q15057 778 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 NEK5Q6P3R8 708 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 C12orf56Q8IXR9 622 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CCDC185Q8N715 623 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 RAB2BQ8WUD1 216 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 EFHD2Q96C19 240 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 HTATIP2Q9BUP3 242 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SP140LQ9H930 580 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 AFF4Q9UHB7 1163 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 LRFN2Q9ULH4 789 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SNX7Q9UNH6 387 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CHADO15335 359 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ITGA2BP08514 1039 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ADRA1DP25100 572 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ADORA2BP29275 332 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 C15orf59Q2T9L4 293 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 WDR72Q3MJ13 1102 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 INTS11Q5TA45 600 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 RNF220Q5VTB9 566 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ZCCHC8Q6NZY4 707 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 NOP9Q86U38 636 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 KATNAL2Q8IYT4 538 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 EEF1AKMT1Q8WVE0 214 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SEPHS2Q99611 448 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CFHR5Q9BXR6 569 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PDGFCQ9NRA1 345 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 TBC1D13Q9NVG8 400 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 STOX2Q9P2F5 926 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 FADS3Q9Y5Q0 445 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ECM29Q5VYK3 1845 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 MOXD2PA6NHM9 499 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 C2orf81A6NN90 581 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 PENKP01210 267 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 VCLP18206 1134 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 FAUP35544 74 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 CHI3L1P36222 383 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 METTL21CQ5VZV1 264 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 RASSF6Q6ZTQ3 369 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 NECAB2Q7Z6G3 386 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 ATG4AQ8WYN0 398 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 MAGEB10Q96LZ2 347 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 HOPXQ9BPY8 73 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 LEF1Q9UJU2 399 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 TRHDEQ9UKU6 1024 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 SSR3Q9UNL2 185 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 ERGIC3Q9Y282 383 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 ERI2A8K979 691 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 LGALS2P05162 132 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 PRKCBP05771 671 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 RCVRNP35243 200 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 PNPLA4P41247 253 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 CD151P48509 253 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 SCN1BQ07699 218 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 ACCSLQ4AC99 568 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 FAM92BQ6ZTR7 304 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 PEX5LQ8IYB4 626 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 OR56A4Q8NGH8 313 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 FIG4Q92562 907 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 GPATCH1Q9BRR8 931 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 ROGDIQ9GZN7 287 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 LRRC19Q9H756 370 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 MARCH7Q9H992 704 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 FOXN3O00409 490 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 CCL5P13501 91 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 LCP1P13796 627 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 ALOX15P16050 662 aaPredicted RBP9.86□□□□□ -0.83
UFD1-205ENST00000459854 GSTM5P46439 218 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 CAPZA2P47755 286 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 IST1P53990 364 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 RAB2AP61019 212 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
UFD1-205ENST00000459854 DUPD1Q68J44 220 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms