RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ITGAVP06756 1048 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 ADRB3P13945 408 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 GLDCP23378 1020 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 EPHB2P29323 1055 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 HCAR3P49019 387 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 METAP1P53582 386 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 RPL7AP62424 266 aaKnown RBP10.18□□□□□ -0.78
HDLBP-228ENST00000459788 MAMLD1Q13495 774 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 ASIC2Q16515 512 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 ZNF805Q5CZA5 627 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 TMCO4Q5TGY1 634 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FAM72AQ5TYM5 149 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FAM72DQ6L9T8 149 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 CAVIN1Q6NZI2 390 aaKnown RBP10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FBXL19Q6PCT2 694 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 LINGO4Q6UY18 593 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 KANSL1Q7Z3B3 1105 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 TMC6Q7Z403 805 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 ABI3BPQ7Z7G0 1075 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 SLCO6A1Q86UG4 719 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 TMPRSS12Q86WS5 348 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FAM72BQ86X60 149 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 CHCHD4Q8N4Q1 142 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 CHST14Q8NCH0 376 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 GDAP1L1Q96MZ0 367 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 GPR27Q9NS67 375 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 HECAQ9UBI9 543 aaPredicted RBP10.18□□□□□ -0.78
HDLBP-228ENST00000459788 DNAI1Q9UI46 699 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 KLK13Q9UKR3 277 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FADS3Q9Y5Q0 445 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 URB1O60287 2271 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 TMEM191CA6NGB0 347 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 A6NNZ2 444 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 C1QTNF9BB2RNN3 333 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 PCDH8O95206 1070 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 LDOC1O95751 146 aaPredicted RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 IGSF6O95976 241 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 CAPNS1P04632 268 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 C1QTNF9P0C862 333 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 PCK1P35558 622 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 ACVRL1P37023 503 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 CSNK1DP48730 415 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SERINC3Q13530 473 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SHBQ15464 509 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SMAD1Q15797 465 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 MYLK3Q32MK0 819 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 ERMARDQ5T6L9 678 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 KYAT3Q6YP21 454 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 VPS36Q86VN1 386 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SPATS2Q86XZ4 545 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 LZTR1Q8N653 840 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 TSC1Q92574 1164 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SLC17A9Q9BYT1 436 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 ISCUQ9H1K1 167 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 TNKS2Q9H2K2 1166 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 HAUS4Q9H6D7 363 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 NOL6Q9H6R4 1146 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 USP29Q9HBJ7 922 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 NDFIP2Q9NV92 336 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 BTBD3Q9Y2F9 522 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 WDFY3Q8IZQ1 3526 aa10.17□□□□□ -0.78
HDLBP-228ENST00000459788 SPEGQ15772 3267 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 CFAP69A5D8W1 941 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 NEMP2A6NFY4 417 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ARHGAP42A6NI28 874 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 C16orf96A6NNT2 1141 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RASA4BC9J798 803 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 PLK4O00444 970 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ENC1O14682 589 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 WNT9AO14904 365 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 AREL1O15033 823 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RASA4O43374 803 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 BUB1O43683 1085 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 GJB6O95452 261 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 TOP3BO95985 862 aaKnown RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 SERPINC1P01008 464 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 FTLP02792 175 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ATXN1LP0C7T5 689 aaKnown RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 PSMA2P25787 234 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 MAT2AP31153 395 aaKnown RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RABIFP47224 123 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 DNA2P51530 1060 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 TPI1P60174 286 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 KLHL30Q0D2K2 578 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ELP6Q0PNE2 266 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RFTN1Q14699 578 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RAB6CQ53S08 254 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 HS1BP3Q53T59 392 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 SCYL2Q6P3W7 929 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 GDPD4Q6W3E5 623 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZCCHC14Q8WYQ9 949 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms