RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CYP17A1P05093 508 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 RHOCP08134 193 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TYRP14679 529 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CHKAP35790 457 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 ADCY8P40145 1251 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CSKP41240 450 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 SLC6A11P48066 632 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CLCN6P51797 869 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 GNA12Q03113 381 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 SLC10A7Q0GE19 358 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 GPS1Q13098 491 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 OLIG2Q13516 323 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CDH18Q13634 790 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 DHCR24Q15392 516 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 MFN1Q8IWA4 741 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CPXM2Q8N436 756 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 DCLK2Q8N568 766 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 ATPAF2Q8N5M1 289 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TEX9Q8N6V9 391 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 OSCP1Q8WVF1 389 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 NAF1Q96HR8 494 aaKnown RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 ERP44Q9BS26 406 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 HPS4Q9NQG7 708 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 HOMER3Q9NSC5 361 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TTLL3Q9Y4R7 772 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 NUMBLQ9Y6R0 609 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 BCLAF3A2AJT9 711 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 C2CD4DB7Z1M9 353 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 PRRT4C9JH25 899 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 K7ERQ8 282 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 M0R296 226 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MBTPS2O43462 519 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 LATS1O95835 1130 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 PEX11BO96011 259 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MT-CO1P00395 513 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 PTPN3P26045 913 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 HLA-FP30511 346 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 SERPINB6P35237 376 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MTHFRP42898 656 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 ZNF135P52742 658 aaPredicted RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 PPIDQ08752 370 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 LMAN2Q12907 356 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 SERINC3Q13530 473 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 DHX34Q14147 1143 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 P3H1Q32P28 736 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MPPE1Q53F39 396 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 ANKRD22Q5VYY1 191 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 DUPD1Q68J44 220 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 HEATR6Q6AI08 1181 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 TRIM67Q6ZTA4 783 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 OTOP3Q7RTS5 596 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MAATS1Q7Z4T9 603 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 ZNF567Q8N184 647 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 KRT222Q8N1A0 295 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 CNTD1Q8N815 330 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 ARHGEF2Q92974 986 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 DDX50Q9BQ39 737 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 FAM83CQ9BQN1 747 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 FEM1AQ9BSK4 669 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 RYDENQ9NUL5 291 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 ABCB8Q9NUT2 735 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 OGFRQ9NZT2 677 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 DKK3Q9UBP4 350 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 INTS6Q9UL03 887 aaKnown RBP10.5□□□□□ -0.73
USP39-210ENST00000459775 NFU1Q9UMS0 254 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 TBC1D30Q9Y2I9 924 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 MYOFQ9NZM1 2061 aa10.5□□□□□ -0.73
USP39-210ENST00000459775 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 GOLGA8MH3BSY2 632 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 EIF3FO00303 357 aaPredicted RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 GAS8O95995 478 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ASGR2P07307 311 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 FAM153BP0C7A2 387 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 GDI1P31150 447 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 HTR7P34969 479 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 SOX9P48436 509 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 MAXP61244 160 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 XRCC4Q13426 336 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 RASA2Q15283 850 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 FAM153CQ494X1 144 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 WDR45BQ5MNZ6 344 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ANKRD20A2Q5SQ80 823 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 IER5LQ5T953 404 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ANKRD20A1Q5TYW2 823 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ANKRD20A3Q5VUR7 823 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CHST9Q7L1S5 443 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CDKL3Q8IVW4 592 aaPredicted RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 CCDC13Q8IYE1 715 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 FBXL6Q8N531 539 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 LZTR1Q8N653 840 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 SORCS1Q8WY21 1168 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 HDAC11Q96DB2 347 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms