RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 PPHLN1Q8NEY8 458 aaKnown RBP16.57■□□□□ 0.24
CAPN13-203ENST00000458085 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 SEMA3CQ99985 751 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 SPON2Q9BUD6 331 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 KDM4CQ9H3R0 1056 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TREX1Q9NSU2 369 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 NEFHP12036 1026 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 TYK2P29597 1187 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 SPRP35270 261 aaPredicted RBP16.56■□□□□ 0.24
CAPN13-203ENST00000458085 RABGAP1LQ5R372 815 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 ADGRF1Q5T601 910 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 N4BP2L1Q5TBK1 243 aaPredicted RBP16.56■□□□□ 0.24
CAPN13-203ENST00000458085 PDPK2PQ6A1A2 396 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 IL31Q6EBC2 164 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 CCDC117Q8IWD4 279 aaPredicted RBP16.56■□□□□ 0.24
CAPN13-203ENST00000458085 ACMSDQ8TDX5 336 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 NSMCE3Q96MG7 304 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
CAPN13-203ENST00000458085 ARNT2Q9HBZ2 717 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 NPHS2Q9NP85 383 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 VPS45Q9NRW7 570 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 PCDHB12Q9Y5F1 795 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 CTSAP10619 480 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 PPM1AP35813 382 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 MAGEA12P43365 314 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 MPP1Q00013 466 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 CTBP1Q13363 440 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 HS6ST3Q8IZP7 471 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 PLD6Q8N2A8 252 aaKnown RBP16.56■□□□□ 0.24
CAPN13-203ENST00000458085 FITM2Q8N6M3 262 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 KLHL23Q8NBE8 558 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 C10orf82Q8WW14 230 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 ISL2Q96A47 359 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 VPS39Q96JC1 886 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 MAGEH1Q9H213 219 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 RXFP1Q9HBX9 757 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 KLHL14Q9P2G3 628 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 MYO7AQ13402 2215 aa16.56■□□□□ 0.24
CAPN13-203ENST00000458085 GREM1O60565 184 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 UBOX5O94941 541 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 ATXN1LP0C7T5 689 aaKnown RBP16.55■□□□□ 0.24
CAPN13-203ENST00000458085 RGRP47804 291 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 SMAD3P84022 425 aaKnown RBP16.55■□□□□ 0.24
CAPN13-203ENST00000458085 CYP4F8P98187 520 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 ZNF235Q14590 738 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 GRM3Q14832 879 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
CAPN13-203ENST00000458085 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 TTC16Q8NEE8 873 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 SIRPGQ9P1W8 387 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 CHD7Q9P2D1 2997 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 PDE4DIPQ5VU43 2346 aa16.55■□□□□ 0.24
CAPN13-203ENST00000458085 CLDN11O75508 207 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 AHSGP02765 367 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 SERPINH1P50454 418 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 HTRA4P83105 476 aaPredicted RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 IRF9Q00978 393 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 CHI3L2Q15782 390 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 SIRPB2Q5JXA9 342 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 RNF43Q68DV7 783 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 CXorf57Q6NSI4 855 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 ZC3HC1Q86WB0 502 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 POLR1EQ9GZS1 481 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 MRM3Q9HC36 420 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 TMEM216Q9P0N5 145 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 PLIN3O60664 434 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 GLRA3O75311 464 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 BPGMP07738 259 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 RHOCP08134 193 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 SCTRP47872 440 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 CSE1LP55060 971 aaKnown RBP16.54■□□□□ 0.24
CAPN13-203ENST00000458085 BST1Q10588 318 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 ZCCHC23Q6ZST2 131 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 NUDCD3Q8IVD9 361 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 BADQ92934 168 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 EXOC2Q96KP1 924 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 CPQQ9Y646 472 aa16.54■□□□□ 0.24
CAPN13-203ENST00000458085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
CAPN13-203ENST00000458085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.53■□□□□ 0.24
CAPN13-203ENST00000458085 A0A1B0GVM2 712 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 LOC285095A0A1B0GVY8 99 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 TCAF2A6NFQ2 919 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 CCL22O00626 93 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 GJA1P17302 382 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 GABRR2P28476 465 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 PPP3CCP48454 512 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 SERPINB8P50452 374 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 ACTN3Q08043 901 aaPredicted RBP16.53■□□□□ 0.24
CAPN13-203ENST00000458085 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
CAPN13-203ENST00000458085 FSCBQ5H9T9 825 aa16.53■□□□□ 0.24
CAPN13-203ENST00000458085 KYAT3Q6YP21 454 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms