RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 SYBUQ9NX95 663 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 SALL4Q9UJQ4 1053 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 ADCY6O43306 1168 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 ENTPD5O75356 428 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 PSMG1O95456 288 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 HNRNPLP14866 589 aaKnown RBP eCLIP11.85□□□□□ -0.516e-7■■□□□ 12.6
SMARCAD1-204ENST00000457823 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 TTPAP49638 278 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 CDH13P55290 713 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 GBE1Q04446 702 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 ANGPT1Q15389 498 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 LPCAT2Q7L5N7 544 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 APLFQ8IW19 511 aaPredicted RBP11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 CDYL2Q8N8U2 506 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 FAM45AQ8TCE6 357 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 MECRQ9BV79 373 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 FTHL17Q9BXU8 183 aa11.85□□□□□ -0.51
SMARCAD1-204ENST00000457823 IGLV3-22A0A075B6J6 115 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 C1orf232A0A0U1RR37 186 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 H3BN98 237 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 TBL1XO60907 577 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 LRCH4O75427 683 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DLGAP3O95886 979 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 TCF3P15923 654 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 TNNI3P19429 210 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 TARBP2Q15633 366 aaKnown RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 NEDD8Q15843 81 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 NRF1Q16656 503 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DET1Q7L5Y6 550 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ARCQ7LC44 396 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 C1orf127Q8N9H9 656 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DNAJB14Q8TBM8 379 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ANKRD27Q96NW4 1050 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ZNF184Q99676 751 aaPredicted RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DHX33Q9H6R0 707 aaKnown RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 GPR25O00155 361 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ULK1O75385 1050 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 TKTP29401 623 aaKnown RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 GRIK3Q13003 919 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 FGD3Q5JSP0 725 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ATAD3BQ5T9A4 648 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 STRADAQ7RTN6 431 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ATAD1Q8NBU5 361 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 BHLHE22Q8NFJ8 381 aaPredicted RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ACTRT2Q8TDY3 377 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ELMO1Q92556 727 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DCUN1D5Q9BTE7 237 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 SNX15Q9NRS6 342 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 CILPO75339 1184 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 CERCAMQ5T4B2 595 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 POTEHQ6S545 545 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 PACS1Q6VY07 963 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 FBXO30Q8TB52 745 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 AGAP11Q8TF27 550 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 MBOAT7Q96N66 472 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ZFP14Q9HCL3 533 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ADPRHL2Q9NX46 363 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 ZNHIT2Q9UHR6 403 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 COG5Q9UP83 839 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
SMARCAD1-204ENST00000457823 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 TREHO43280 583 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 PAGE1O75459 146 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 HGFP14210 728 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 COX7A2P14406 83 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 LPOP22079 712 aaPredicted RBP11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 SOX6P35712 828 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 DUSP4Q13115 394 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 C1DQ13901 141 aaKnown RBP11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 NOMO1Q15155 1222 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 RNF43Q68DV7 783 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 RASGEF1CQ8N431 466 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 CSPG4P5Q96PW8 444 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 MRPL57Q9BQC6 102 aaKnown RBP11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 ATP13A3Q9H7F0 1226 aa11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 KRCC1Q9NPI7 259 aaPredicted RBP11.83□□□□□ -0.51
SMARCAD1-204ENST00000457823 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 SNRPB2P08579 225 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CLTBP09497 229 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 GRIA3P42263 894 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PSMD5Q16401 504 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CYP2A13Q16696 494 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 INSCQ1MX18 579 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 YTHDF3Q7Z739 585 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CDK20Q8IZL9 346 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PIK3R5Q8WYR1 880 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms