RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 YBX3P16989 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLIP4-208ENST00000456385 POLR2IP36954 125 aaKnown RBP10.44□□□□□ -0.74
CLIP4-208ENST00000456385 SLC7A2P52569 658 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 NME5P56597 212 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 NFATC3Q12968 1075 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 SLC36A3Q495N2 470 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 LDLRAP1Q5SW96 308 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 CERCAMQ5T4B2 595 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 GALNT18Q6P9A2 607 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 ERMP1Q7Z2K6 904 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 BTLAQ7Z6A9 289 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 DHFR2Q86XF0 187 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 ZNF567Q8N184 647 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 PELI3Q8N2H9 469 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 LRRC71Q8N4P6 559 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 NSUN6Q8TEA1 469 aaKnown RBP10.44□□□□□ -0.74
CLIP4-208ENST00000456385 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 APOL2Q9BQE5 337 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 MTG1Q9BT17 334 aaPredicted RBP10.44□□□□□ -0.74
CLIP4-208ENST00000456385 EFHD1Q9BUP0 239 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 TNFRSF12AQ9NP84 129 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 TMPRSS4Q9NRS4 437 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 ERGIC3Q9Y282 383 aa10.44□□□□□ -0.74
CLIP4-208ENST00000456385 RBMX2Q9Y388 322 aaKnown RBP10.44□□□□□ -0.74
CLIP4-208ENST00000456385 RNF103-CHMP3A0A140T963 221 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 SPATA31C2B4DYI2 1134 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 VWA5AO00534 786 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 DPYSL4O14531 572 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 CABYRO75952 493 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 MT-CO1P00395 513 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 SLC6A3Q01959 620 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 TRAP1Q12931 704 aaKnown RBP10.43□□□□□ -0.74
CLIP4-208ENST00000456385 FASTKQ14296 549 aaKnown RBP10.43□□□□□ -0.74
CLIP4-208ENST00000456385 PLCL1Q15111 1095 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 GOLGA7BQ2TAP0 167 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 PPP1R26Q5T8A7 1209 aaPredicted RBP10.43□□□□□ -0.74
CLIP4-208ENST00000456385 FAM117BQ6P1L5 589 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 CNSTQ6PJW8 725 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 SLC7A5P1Q8MH63 180 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 DNAAF3Q8N9W5 541 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 TNIP2Q8NFZ5 429 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 CXorf38Q8TB03 319 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 MAELQ96JY0 434 aaKnown RBP10.43□□□□□ -0.74
CLIP4-208ENST00000456385 LPIN3Q9BQK8 851 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 CHRAC1Q9NRG0 131 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 SACM1LQ9NTJ5 587 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 XPR1Q9UBH6 696 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 EGFL7Q9UHF1 273 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 TLK1Q9UKI8 766 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 TLL2Q9Y6L7 1015 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 ANKRD31Q8N7Z5 1873 aa10.43□□□□□ -0.74
CLIP4-208ENST00000456385 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 DYNC1LI2O43237 492 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 DDHD2O94830 711 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 IL18RAPO95256 599 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TPH1P17752 444 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 MAP4P27816 1152 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 C1QTNF8P60827 252 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 YBX1P67809 324 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 LAMTOR4Q0VGL1 99 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 STX5Q13190 355 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 USP10Q14694 798 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SURF1Q15526 300 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TSTD2Q5T7W7 516 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 XRRA1Q6P2D8 792 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 LCLAT1Q6UWP7 414 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 PID1Q7Z2X4 250 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TMEM135Q86UB9 458 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 PIGZQ86VD9 579 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 IGFN1Q86VF2 1251 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 CAMK1DQ8IU85 385 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SPPL2CQ8IUH8 684 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SNX29P2Q8IUI4 249 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 CENPLQ8N0S6 344 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 MFSD2AQ8NA29 543 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 OR2T34Q8NGX1 318 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 OR2T3Q8NH03 318 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SPPL2BQ8TCT7 592 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TAMM41Q96BW9 452 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 DUS3LQ96G46 650 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 RPL10LQ96L21 214 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 PCYT2Q99447 389 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 RPAP3Q9H6T3 665 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 LRRC40Q9H9A6 602 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 IL1RL2Q9HB29 575 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 EIF2B3Q9NR50 452 aaKnown RBP10.42□□□□□ -0.74
CLIP4-208ENST00000456385 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 GTSE1Q9NYZ3 720 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TMEM181Q9P2C4 612 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 GNPTGQ9UJJ9 305 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 VANGL2Q9ULK5 521 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 OAZ3Q9UMX2 235 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 TMED5Q9Y3A6 229 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 SIP14410 1827 aa10.42□□□□□ -0.74
CLIP4-208ENST00000456385 NEMP2A6NFY4 417 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms