RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 ARGLU1Q9NWB6 273 aaPredicted RBP11.16□□□□□ -0.62
SCN9A-205ENST00000454569 PIH1D1Q9NWS0 290 aaKnown RBP11.16□□□□□ -0.62
SCN9A-205ENST00000454569 PAK5Q9P286 719 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 TPX2Q9ULW0 747 aaKnown RBP11.16□□□□□ -0.62
SCN9A-205ENST00000454569 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 ERVW-1Q9UQF0 538 aa11.16□□□□□ -0.62
SCN9A-205ENST00000454569 BPTFQ12830 3046 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.15□□□□□ -0.62
SCN9A-205ENST00000454569 TTC34A8MYJ7 566 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 WASH3PC4AMC7 463 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 OPHN1O60890 802 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 USP12O75317 370 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 BANF1O75531 89 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 CR2P20023 1033 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 CD72P21854 359 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 SERPINH1P50454 418 aaKnown RBP11.15□□□□□ -0.62
SCN9A-205ENST00000454569 RENBPP51606 427 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 DRG2P55039 364 aaKnown RBP11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ECT2LQ008S8 904 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ZP2Q05996 745 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ITKQ08881 620 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 NR1H3Q13133 447 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 SLC12A1Q13621 1099 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 PARP6Q2NL67 630 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ZNF534Q76KX8 674 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 KDELC2Q7Z4H8 507 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 AHI1Q8N157 1196 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 SH2D3CQ8N5H7 860 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 TERB1Q8NA31 727 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 OR6K2Q8NGY2 324 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 PRCCQ92733 491 aaPredicted RBP11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ACDQ96AP0 544 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ERLEC1Q96DZ1 483 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ZNF599Q96NL3 588 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 SMIM14Q96QK8 99 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 PSKH2Q96QS6 385 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ACOX2Q99424 681 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 APOL2Q9BQE5 337 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 C2orf49Q9BVC5 232 aaPredicted RBP11.15□□□□□ -0.62
SCN9A-205ENST00000454569 TM6SF2Q9BZW4 377 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 CIPCQ9C0C6 399 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 RAB17Q9H0T7 212 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 GBA3Q9H227 469 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 ELOVL2Q9NXB9 296 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 RSPH14Q9UHP6 348 aa11.15□□□□□ -0.62
SCN9A-205ENST00000454569 LRRK1Q38SD2 2015 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 SPECC1L-ADORA2AF8WAN1 911 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 K7EQS6 105 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 MTSS1O43312 755 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 AVILO75366 819 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 KAT7O95251 611 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 POLR2EP19388 210 aaKnown RBP11.14□□□□□ -0.63
SCN9A-205ENST00000454569 CTHP32929 405 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 CD86P42081 329 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 SKOR1P84550 965 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 SEMA5AQ13591 1074 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
SCN9A-205ENST00000454569 FNBP1LQ5T0N5 605 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 KCTD11Q693B1 232 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 KDELC1Q6UW63 502 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 IFT20Q8IY31 132 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 ATP11CQ8NB49 1132 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 FRS2Q8WU20 508 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 TADA1Q96BN2 335 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
SCN9A-205ENST00000454569 GDAP1L1Q96MZ0 367 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 FCRL5Q96RD9 977 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 VAT1Q99536 393 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 MGME1Q9BQP7 344 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 NOD2Q9HC29 1040 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 CD320Q9NPF0 282 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 WHRNQ9P202 907 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 TRHDEQ9UKU6 1024 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 HS3ST2Q9Y278 367 aa11.14□□□□□ -0.63
SCN9A-205ENST00000454569 AGTP01019 485 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 TUBBP07437 444 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 APRTP07741 180 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 HLA-EP13747 358 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 ITIH2P19823 946 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 MCM3P25205 808 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 MAGEA6P43360 314 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 SCNN1BP51168 640 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 ZNF235Q14590 738 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 PON2Q15165 354 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 PTPRRQ15256 657 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 DLG2Q15700 870 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
SCN9A-205ENST00000454569 EGFLAMQ63HQ2 1017 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 FSTL4Q6MZW2 842 aa11.13□□□□□ -0.63
SCN9A-205ENST00000454569 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms