RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FEM1CQ96JP0 617 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 CNDP2Q96KP4 475 aaKnown RBP13.11□□□□□ -0.31
CHD3-206ENST00000452447 CATSPERBQ9H7T0 1116 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 FZD10Q9ULW2 581 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 ZFYVE26Q68DK2 2539 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 KRIT1O00522 736 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 NEMP1O14524 444 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 ENC1O14682 589 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 DKK1O94907 266 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
CHD3-206ENST00000452447 CD160O95971 181 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 GSRP00390 522 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
CHD3-206ENST00000452447 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 CALN1Q9BXU9 219 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
CHD3-206ENST00000452447 ZFR2Q9UPR6 939 aaKnown RBP13.11□□□□□ -0.31
CHD3-206ENST00000452447 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 SRRM3A6NNA2 597 aaPredicted RBP13.1□□□□□ -0.31
CHD3-206ENST00000452447 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
CHD3-206ENST00000452447 SDC3O75056 442 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 SERPINC1P01008 464 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 CDK4P11802 303 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 PSMA2P25787 234 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 GKP32189 559 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 YBEYP58557 167 aaPredicted RBP13.1□□□□□ -0.31
CHD3-206ENST00000452447 RAD51Q06609 339 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 MYLK3Q32MK0 819 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 ZNF805Q5CZA5 627 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 DHRS13Q6UX07 377 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
CHD3-206ENST00000452447 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 FAM174AQ8TBP5 190 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 RAB7BQ96AH8 199 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 ARHGEF26Q96DR7 871 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 SLC17A9Q9BYT1 436 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 HAUS4Q9H6D7 363 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 PCDHGA1Q9Y5H4 931 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 FADS3Q9Y5Q0 445 aa13.1□□□□□ -0.31
CHD3-206ENST00000452447 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 TSPAN6O43657 245 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 AP1G1O43747 822 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 TMCC1O94876 653 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
CHD3-206ENST00000452447 UGT2B4P06133 528 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 C1SP09871 688 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 CLDN2P57739 230 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 TPI1P60174 286 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 TPM4P67936 248 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 DNAJC3Q13217 504 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 SGCGQ13326 291 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 SMAD1Q15797 465 aaKnown RBP13.09□□□□□ -0.31
CHD3-206ENST00000452447 PARP15Q460N3 678 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
CHD3-206ENST00000452447 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 HMCESQ96FZ2 354 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
CHD3-206ENST00000452447 SYT11Q9BT88 431 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 CCDC86Q9H6F5 360 aaKnown RBP13.09□□□□□ -0.31
CHD3-206ENST00000452447 KLHL11Q9NVR0 708 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 HS3ST3A1Q9Y663 406 aa13.09□□□□□ -0.31
CHD3-206ENST00000452447 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 A6NNZ2 444 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 RASA4BC9J798 803 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
CHD3-206ENST00000452447 RASA4O43374 803 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 RFPL3O75679 317 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 RNF8O76064 485 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 IGSF6O95976 241 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 GZMAP12544 262 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 HTR7P34969 479 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 RHOAP61586 193 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 OGDHQ02218 1023 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 ATXN7L2Q5T6C5 722 aaPredicted RBP13.08□□□□□ -0.32
CHD3-206ENST00000452447 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 Q6ZSR6 202 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
CHD3-206ENST00000452447 PTAR1Q7Z6K3 402 aaPredicted RBP13.08□□□□□ -0.32
CHD3-206ENST00000452447 TMPRSS12Q86WS5 348 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 DCP2Q8IU60 420 aaKnown RBP13.08□□□□□ -0.32
CHD3-206ENST00000452447 UMODL1-AS1Q8N2C9 162 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 TTYH3Q9C0H2 523 aa13.08□□□□□ -0.32
CHD3-206ENST00000452447 NOL6Q9H6R4 1146 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms