RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 BCCIPQ9P287 314 aaKnown RBP eCLIP24.4■■□□□ 1.5
CPSF4-207ENST00000451876 PGRMC1O00264 195 aaKnown RBP24.39■■□□□ 1.5
CPSF4-207ENST00000451876 ALOX15BO15296 676 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 LIASO43766 372 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 CR2P20023 1033 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 PTPN3P26045 913 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 CHRNA3P32297 505 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 RPS14P62263 151 aaKnown RBP24.39■■□□□ 1.5
CPSF4-207ENST00000451876 CSTF1Q05048 431 aaKnown RBP24.39■■□□□ 1.5
CPSF4-207ENST00000451876 ANGPT1Q15389 498 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 DARS2Q6PI48 645 aaKnown RBP24.39■■□□□ 1.5
CPSF4-207ENST00000451876 CDKL3Q8IVW4 592 aaPredicted RBP24.39■■□□□ 1.5
CPSF4-207ENST00000451876 BBS5Q8N3I7 341 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 ACTRT1Q8TDG2 376 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 CAPZA3Q96KX2 299 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 IL36AQ9UHA7 158 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 TTLL3Q9Y4R7 772 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 VPS13AQ96RL7 3174 aa24.39■■□□□ 1.5
CPSF4-207ENST00000451876 KRIT1O00522 736 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 LEFTY1O75610 366 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 ALDH1A2O94788 518 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 IL1BP01584 269 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 DEKP35659 375 aaKnown RBP24.39■■□□□ 1.49
CPSF4-207ENST00000451876 PSMD8P48556 350 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 MYLK3Q32MK0 819 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 POM121L1PQ3SYA9 428 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 ZNF776Q68DI1 518 aaPredicted RBP24.39■■□□□ 1.49
CPSF4-207ENST00000451876 KIAA1324Q6UXG2 1013 aaKnown RBP24.39■■□□□ 1.49
CPSF4-207ENST00000451876 PGBD3Q8N328 593 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.39■■□□□ 1.49
CPSF4-207ENST00000451876 AGAP3Q96P47 875 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 HEPHQ9BQS7 1158 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 EBF1Q9UH73 591 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 FBXO4Q9UKT5 387 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 PPM1HQ9ULR3 514 aa24.39■■□□□ 1.49
CPSF4-207ENST00000451876 FARP1Q9Y4F1 1045 aaPredicted RBP24.39■■□□□ 1.49
CPSF4-207ENST00000451876 PLXND1Q9Y4D7 1925 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 BCLAF3A2AJT9 711 aaKnown RBP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 GALR2O43603 387 aaPredicted RBP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 C7P10643 843 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 HSPA9P38646 679 aaKnown RBP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 SCNN1BP51168 640 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 NSUN2Q08J23 767 aaKnown RBP eCLIP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 SNX1Q13596 522 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 OASLQ15646 514 aaKnown RBP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 CST6Q15828 149 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 ARSIQ5FYB1 569 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 CREG2Q8IUH2 290 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 PRELID2Q8N945 189 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 PIP4K2CQ8TBX8 421 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 PRCCQ92733 491 aaPredicted RBP24.38■■□□□ 1.49
CPSF4-207ENST00000451876 SIPA1Q96FS4 1042 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 TMEM121Q9BTD3 319 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 AP1M1Q9BXS5 423 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 USP29Q9HBJ7 922 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 ATP8A1Q9Y2Q0 1164 aa24.38■■□□□ 1.49
CPSF4-207ENST00000451876 KCNN4O15554 427 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 NEBLO76041 1014 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 GDF10P55107 478 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 TEX44Q53QW1 395 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 DSG4Q86SJ6 1040 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 SRLQ86TD4 932 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 MAIP1Q8WWC4 291 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 NKD2Q969F2 451 aaPredicted RBP24.37■■□□□ 1.49
CPSF4-207ENST00000451876 POLR1EQ9GZS1 481 aaKnown RBP24.37■■□□□ 1.49
CPSF4-207ENST00000451876 AMACRQ9UHK6 382 aa24.37■■□□□ 1.49
CPSF4-207ENST00000451876 MID1O15344 667 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 RNASEH1O60930 286 aaKnown RBP24.36■■□□□ 1.49
CPSF4-207ENST00000451876 PIGNO95427 931 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 POP4O95707 220 aaKnown RBP24.36■■□□□ 1.49
CPSF4-207ENST00000451876 HOXA6P31267 233 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 CSNK1DP48730 415 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 DSC2Q02487 901 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 ITKQ08881 620 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 BYSLQ13895 437 aaKnown RBP24.36■■□□□ 1.49
CPSF4-207ENST00000451876 IHHQ14623 411 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 CCNG2Q16589 344 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 ALG1LQ6GMV1 187 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 ZNF567Q8N184 647 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 NUDCD1Q96RS6 583 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 SEMA3CQ99985 751 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 FRMD8P1Q9BZ68 369 aaPredicted RBP24.36■■□□□ 1.49
CPSF4-207ENST00000451876 NOD2Q9HC29 1040 aa24.36■■□□□ 1.49
CPSF4-207ENST00000451876 ZBTB24O43167 697 aaPredicted RBP24.35■■□□□ 1.49
CPSF4-207ENST00000451876 MTSS1O43312 755 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 PRNPP04156 253 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 SLC8A1P32418 973 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 FNTBP49356 437 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 AADATQ8N5Z0 425 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 TMIEQ8NEW7 156 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 ARRDC2Q8TBH0 407 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 TEKT5Q96M29 485 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 SERGEFQ9UGK8 458 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 NUMA1Q14980 2115 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 PLK4O00444 970 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 KPNA3O00505 521 aaPredicted RBP24.35■■□□□ 1.49
CPSF4-207ENST00000451876 AXIN1O15169 862 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 DNTTP04053 509 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 UGT2B4P06133 528 aa24.35■■□□□ 1.49
CPSF4-207ENST00000451876 CD68P34810 354 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms