RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SNRPD1P62314 119 aaKnown RBP9.84□□□□□ -0.83
USP54-207ENST00000451492 SLC20A2Q08357 652 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 BNIP3Q12983 259 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 SUZ12Q15022 739 aaKnown RBP9.84□□□□□ -0.83
USP54-207ENST00000451492 ERMARDQ5T6L9 678 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 PTAR1Q7Z6K3 402 aaPredicted RBP9.84□□□□□ -0.83
USP54-207ENST00000451492 VPS36Q86VN1 386 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 HORMAD1Q86X24 394 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 ARFGAP1Q8N6T3 406 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 RNF214Q8ND24 703 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 OR2AP1Q8NGE2 309 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 HSPH1Q92598 858 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 FAM131CQ96AQ9 280 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 KLHL32Q96NJ5 620 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 THAP2Q9H0W7 228 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 KDM4CQ9H3R0 1056 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 CAAP1Q9H8G2 361 aa9.84□□□□□ -0.83
USP54-207ENST00000451492 A0A1W2PQJ5 194 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 C16orf96A6NNT2 1141 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 PRAMEF26H0Y7S4 382 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 J3KR12 359 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 TLR4O00206 839 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 INSIG1O15503 277 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 CBFA2T3O75081 653 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 LRCH4O75427 683 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 PIGNO95427 931 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 GSRP00390 522 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 SERPING1P05155 500 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 THEGLP0DJG4 465 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 GZMAP12544 262 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 HNRNPA2B1P22626 353 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 EPHA8P29322 1005 aaPredicted RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 ZBED6P86452 979 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 SHC2P98077 582 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 CCDC15Q0P6D6 951 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 SERINC3Q13530 473 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 HNRNPDQ14103 355 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 INAVAQ3KP66 663 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 FIGNQ5HY92 759 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 UNQ6494/PRO21346Q6UXR6 183 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 KDM7AQ6ZMT4 941 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 ARHGAP36Q6ZRI8 547 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 RFX8Q6ZV50 586 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 SLCO6A1Q86UG4 719 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 SPATS2Q86XZ4 545 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 EID2Q8N6I1 236 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 PAF1Q8N7H5 531 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 OR13H1Q8NG92 308 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 ARHGEF26Q96DR7 871 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 GDAP1L1Q96MZ0 367 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 NUP85Q9BW27 656 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 HDAC8Q9BY41 377 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 EDEM3Q9BZQ6 932 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 TSPY26PQ9H489 355 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 MRPL47Q9HD33 250 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 UBA2Q9UBT2 640 aaPredicted RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 FTSJ1Q9UET6 329 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 ANAPC7Q9UJX3 599 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 WASF3Q9UPY6 502 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 DMTF1Q9Y222 760 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 APOBEC2Q9Y235 224 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 LUC7L2Q9Y383 392 aaKnown RBP9.83□□□□□ -0.84
USP54-207ENST00000451492 MFHAS1Q9Y4C4 1052 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 PCDHGB2Q9Y5G2 931 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 MYLKQ15746 1914 aa9.83□□□□□ -0.84
USP54-207ENST00000451492 LRP4O75096 1905 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 A0A087X0T9 212 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 ARHGAP42A6NI28 874 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 PRKCGP05129 697 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 TPM3P06753 285 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 FAM228BP0C875 321 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 MYBL1P10243 752 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ERCC2P18074 760 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ITIH2P19823 946 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 XPAP23025 273 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 AKT2P31751 481 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ARRB1P49407 418 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 PAPOLAP51003 745 aaKnown RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 CLDN6P56747 220 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 SEMG2Q02383 582 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 RAD51Q06609 339 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 DNAJC3Q13217 504 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 SHBQ15464 509 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 SKOR2Q2VWA4 1001 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 MYLK3Q32MK0 819 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 PARP15Q460N3 678 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ZNF805Q5CZA5 627 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ZNF542PQ5EBM4 170 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 CCDC122Q5T0U0 273 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 GDPD4Q6W3E5 623 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 CYP4V2Q6ZWL3 525 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 MARCH9Q86YJ5 346 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 TP53INP2Q8IXH6 220 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 NPWQ8N729 165 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 MFSD2AQ8NA29 543 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms