RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PCSK7Q16549 785 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SNRNP35Q16560 246 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 C6orf10Q5SRN2 563 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CCNYL2Q5T2Q4 361 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 XAF1Q6GPH4 301 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 NEK5Q6P3R8 708 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CRTC3Q6UUV7 619 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 NEK10Q6ZWH5 1172 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TFAP2DQ7Z6R9 452 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SLCO6A1Q86UG4 719 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SLC51BQ86UW2 128 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CBWD2Q8IUF1 395 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 POMGNT1Q8WZA1 660 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 HDAC11Q96DB2 347 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 MAGED4Q96JG8 741 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 PPP1R36Q96LQ0 422 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ASB16Q96NS5 453 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 MCEEQ96PE7 176 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 PI4K2AQ9BTU6 479 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 IRF2BPLQ9H1B7 796 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ZBTB26Q9HCK0 441 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TOPORSQ9NS56 1045 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 WARS2Q9UGM6 360 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 EIF3LQ9Y262 564 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 PCDHGA7Q9Y5G6 932 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CDK5RAP2Q96SN8 1893 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 MYH9P35579 1960 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 HEATR9A2RTY3 570 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 TCAF2A6NFQ2 919 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 EVPLLA8MZ36 301 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 WDR64B1ANS9 1081 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 H7C0C1 242 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 CHMP2AO43633 222 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 SYNCRIPO60506 623 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 TOMM70O94826 608 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 PRKCGP05129 697 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 BMP4P12644 408 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 ENPP1P22413 925 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 HIBADHP31937 336 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 CAPGP40121 348 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 ETV3P41162 512 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 SEC13P55735 322 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 RPS6P62753 249 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 C19orf57Q0VDD7 668 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 FSTL1Q12841 308 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 ILF2Q12905 390 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 CBLBQ13191 982 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 NPTX1Q15818 432 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 GPR162Q16538 588 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 IRAK1BP1Q5VVH5 260 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 BROXQ5VW32 411 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 ZCCHC8Q6NZY4 707 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 UTS2BQ765I0 119 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 PCDH20Q8N6Y1 951 aaKnown RBP8.72□□□□□ -1.01
LSM5-208ENST00000450169 FIG4Q92562 907 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 SNX18Q96RF0 628 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 ZNF385DQ9H6B1 395 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 RAB6BQ9NRW1 208 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 C1orf112Q9NSG2 853 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 STMN3Q9NZ72 180 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 TFCP2L1Q9NZI6 479 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 SFMBT1Q9UHJ3 866 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 RAD54BQ9Y620 910 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
LSM5-208ENST00000450169 B8ZZF3 427 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 E7ENX8 843 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 AP3B1O00203 1094 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 ARHGAP33O14559 1287 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 MEIS2O14770 477 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 CCNKO75909 580 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 GSNP06396 782 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 MPP1Q00013 466 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 GALK2Q01415 458 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 OGDHQ02218 1023 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 HSPA14Q0VDF9 509 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 RALGDSQ12967 914 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SELPLGQ14242 412 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SMTNL2Q2TAL5 461 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 TMEM198Q66K66 360 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 DCUN1D2Q6PH85 259 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SLC16A12Q6ZSM3 486 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 KCTD1Q719H9 257 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 FKBP9P1Q75LS8 142 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 HACE1Q8IYU2 909 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 ABRAQ8N0Z2 381 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 DAW1Q8N136 415 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SCML4Q8N228 414 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 SFRP1Q8N474 314 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.01
LSM5-208ENST00000450169 TRIM63Q969Q1 353 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms