RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.48
RCL1-208ENST00000448872 NOD2Q9HC29 1040 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 SARDHQ9UL12 918 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 SLC8A2Q9UPR5 921 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 ATP8A1Q9Y2Q0 1164 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.48
RCL1-208ENST00000448872 MYOFQ9NZM1 2061 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ATG13O75143 517 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 NEBLO76041 1014 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 PIGNO95427 931 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 GSRP00390 522 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 IFNB1P01574 187 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 CR2P20023 1033 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 STARD3Q14849 445 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 TRIP13Q15645 432 aaPredicted RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 HSF5Q4G112 596 aaPredicted RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 CCDC137Q6PK04 289 aaKnown RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 TSSK4Q6SA08 328 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 PID1Q7Z2X4 250 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 MMAAQ8IVH4 418 aaKnown RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 FBXL6Q8N531 539 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 SPATA4Q8NEY3 305 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 SPATA22Q8NHS9 363 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ARRDC2Q8TBH0 407 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 GDAP1L1Q96MZ0 367 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 SEMA3CQ99985 751 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 GORASP1Q9BQQ3 440 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 ZDHHC6Q9H6R6 413 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 SPATA6Q9NWH7 488 aaPredicted RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 KLHL8Q9P2G9 620 aaPredicted RBP12.02□□□□□ -0.49
RCL1-208ENST00000448872 RNF14Q9UBS8 474 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 SUN2Q9UH99 717 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 WASF2Q9Y6W5 498 aa12.02□□□□□ -0.49
RCL1-208ENST00000448872 F5P12259 2224 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 PLK4O00444 970 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 MTSS1O43312 755 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 LEFTY1O75610 366 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 IGSF6O95976 241 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 MMP2P08253 660 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 GABRG2P18507 467 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 NDUFV2P19404 249 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 NFKB1P19838 968 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 CHRNA3P32297 505 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 PSMD8P48556 350 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 SNRPD1P62314 119 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 ELAVL3Q14576 367 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 FAXCQ5TGI0 409 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 ANO7Q6IWH7 933 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 GSTA5Q7RTV2 222 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 BMP8AQ7Z5Y6 402 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 SRLQ86TD4 932 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 CAMK1DQ8IU85 385 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 BBS5Q8N3I7 341 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 HMGB4Q8WW32 186 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 RTP4Q96DX8 246 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 SPATA13Q96N96 652 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 RBM15Q96T37 977 aaKnown RBP eCLIP12.01□□□□□ -0.492e-9■□□□□ 10.6
RCL1-208ENST00000448872 POLR1EQ9GZS1 481 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 RSPH9Q9H1X1 276 aaPredicted RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 GLOD4Q9HC38 313 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 CD93Q9NPY3 652 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 SCUBE2Q9NQ36 999 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 HOMER3Q9NSC5 361 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 UBP1Q9NZI7 540 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 IL36AQ9UHA7 158 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 PPM1HQ9ULR3 514 aa12.01□□□□□ -0.49
RCL1-208ENST00000448872 DRG1Q9Y295 367 aaKnown RBP12.01□□□□□ -0.49
RCL1-208ENST00000448872 CFAP69A5D8W1 941 aa12□□□□□ -0.49
RCL1-208ENST00000448872 C5orf60A6NFR6 353 aa12□□□□□ -0.49
RCL1-208ENST00000448872 K7ESF4 209 aa12□□□□□ -0.49
RCL1-208ENST00000448872 GCATO75600 419 aa12□□□□□ -0.49
RCL1-208ENST00000448872 METTL18O95568 372 aa12□□□□□ -0.49
RCL1-208ENST00000448872 MT-CYBP00156 380 aaPredicted RBP12□□□□□ -0.49
RCL1-208ENST00000448872 IL1BP01584 269 aa12□□□□□ -0.49
RCL1-208ENST00000448872 PSMB4P28070 264 aa12□□□□□ -0.49
RCL1-208ENST00000448872 CD86P42081 329 aa12□□□□□ -0.49
RCL1-208ENST00000448872 CXCL12P48061 93 aa12□□□□□ -0.49
RCL1-208ENST00000448872 DGKEP52429 567 aa12□□□□□ -0.49
RCL1-208ENST00000448872 RPS14P62263 151 aaKnown RBP12□□□□□ -0.49
RCL1-208ENST00000448872 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
RCL1-208ENST00000448872 DMWDQ09019 674 aa12□□□□□ -0.49
RCL1-208ENST00000448872 E2F5Q15329 346 aa12□□□□□ -0.49
RCL1-208ENST00000448872 DNTTIP2Q5QJE6 756 aaKnown RBP12□□□□□ -0.49
RCL1-208ENST00000448872 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
RCL1-208ENST00000448872 TMPRSS6Q8IU80 811 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms