RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 HTR3CQ8WXA8 447 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 ATG4AQ8WYN0 398 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 PTPRN2Q92932 1015 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 NKD2Q969F2 451 aaPredicted RBP7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 CAPZA3Q96KX2 299 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 QKIQ96PU8 341 aaKnown RBP eCLIP7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 CHRDQ9H2X0 955 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 MTG2Q9H4K7 406 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 PRSS16Q9NQE7 514 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 POLR3BQ9NW08 1133 aaPredicted RBP7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 RBM22Q9NW64 420 aaKnown RBP eCLIP7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 SMARCAL1Q9NZC9 954 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 SEPT3Q9UH03 358 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 DNPEPQ9ULA0 475 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 MMP17Q9ULZ9 603 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 SLC8A2Q9UPR5 921 aa7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 DRG1Q9Y295 367 aaKnown RBP7.67□□□□□ -1.18
AC004540.1-206ENST00000448056 NUP205Q92621 2012 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 EDDM13A0A1B0GTR0 161 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 A0A1W2PQF6 199 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PDE2AO00408 941 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MUSKO15146 869 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ZBTB24O43167 697 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 SYNCRIPO60506 623 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 URI1O94763 535 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ITGAVP06756 1048 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PTPN3P26045 913 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 STIP1P31948 543 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PAFAH1B1P43034 410 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MAGEA9P43362 315 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MMP13P45452 471 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 RHOAP61586 193 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 IFI35P80217 286 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 WASHC5Q12768 1159 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MTAPQ13126 283 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CAMK2GQ13555 558 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 OASLQ15646 514 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CRY1Q16526 586 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CYP1B1Q16678 543 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MYLK3Q32MK0 819 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TEX44Q53QW1 395 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CARD16Q5EG05 197 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 FAM182AQ5T1J6 154 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 C22orf39Q6P5X5 142 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 SYT13Q7L8C5 426 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CDKL3Q8IVW4 592 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 BBS5Q8N3I7 341 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PGBD5Q8N414 524 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 FBXL6Q8N531 539 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CNTD1Q8N815 330 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF366Q8N895 744 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 FAM71DQ8N9W8 422 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 OR2A12Q8NGT7 310 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 MAGOHBQ96A72 148 aaKnown RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 POM121Q96HA1 1249 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF419Q96HQ0 510 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 PSKH2Q96QS6 385 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 FAM129BQ96TA1 746 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 VAT1Q99536 393 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 IL12RB2Q99665 862 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 FERMT1Q9BQL6 677 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TMEM121Q9BTD3 319 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 IER2Q9BTL4 223 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CINPQ9BW66 212 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TNKS2Q9H2K2 1166 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CD248Q9HCU0 757 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 C2orf42Q9NWW7 574 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 SEPT10Q9P0V9 454 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 HECAQ9UBI9 543 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 LHX3Q9UBR4 397 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 AMACRQ9UHK6 382 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 CDC23Q9UJX2 597 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF148Q9UQR1 794 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 ATP8A1Q9Y2Q0 1164 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 KIAA1549LQ6ZVL6 1849 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 TECTAO75443 2155 aa7.66□□□□□ -1.18
AC004540.1-206ENST00000448056 GOLGA6L10A0A0M3HER8 536 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 TTC24A2A3L6 582 aaPredicted RBP7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 CFAP69A5D8W1 941 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 C5orf60A6NFR6 353 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 RNF103O00237 685 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 KCNN4O15554 427 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 BNIP3LO60238 219 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 SIN3BO75182 1162 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 GCATO75600 419 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 ZNF189O75820 626 aaPredicted RBP7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 NEBLO76041 1014 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 POP4O95707 220 aaKnown RBP7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 GSRP00390 522 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 HOXB2P14652 356 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 CR2P20023 1033 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 CES1P23141 567 aa7.65□□□□□ -1.18
AC004540.1-206ENST00000448056 COILP38432 576 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms