RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 ZNF670Q9BS34 389 aa21.17■□□□□ 0.98
GARNL3-209ENST00000446764 HDAC8Q9BY41 377 aa21.17■□□□□ 0.98
GARNL3-209ENST00000446764 EBF2Q9HAK2 575 aa21.17■□□□□ 0.98
GARNL3-209ENST00000446764 SP110Q9HB58 689 aa21.17■□□□□ 0.98
GARNL3-209ENST00000446764 THADAQ6YHU6 1953 aa21.17■□□□□ 0.98
GARNL3-209ENST00000446764 A0A1W2PPC4 97 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 KRIT1O00522 736 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 CDX4O14627 284 aaPredicted RBP21.16■□□□□ 0.98
GARNL3-209ENST00000446764 SLC30A4O14863 429 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 IGSF6O95976 241 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 ITGB7P26010 798 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 SLC1A1P43005 524 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 PPP2CBP62714 309 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 PPP2CAP67775 309 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 CCDC15Q0P6D6 951 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 ANKRD20A8PQ5CZ79 823 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 TMEM139Q8IV31 216 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 MAP7D3Q8IWC1 876 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 PCDH19Q8TAB3 1148 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 RAPGEF5Q92565 580 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 EXOC2Q96KP1 924 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 BAG1Q99933 345 aaPredicted RBP21.16■□□□□ 0.98
GARNL3-209ENST00000446764 LUC7LQ9NQ29 371 aaKnown RBP21.16■□□□□ 0.98
GARNL3-209ENST00000446764 REXO2Q9Y3B8 237 aaKnown RBP21.16■□□□□ 0.98
GARNL3-209ENST00000446764 HYOU1Q9Y4L1 999 aa21.16■□□□□ 0.98
GARNL3-209ENST00000446764 CFAP54Q96N23 3096 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 SDK1Q7Z5N4 2213 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 PALMO75781 387 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 COMTP21964 271 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 KDELR1P24390 212 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 SERPINB6P35237 376 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 PUM1Q14671 1186 aaKnown RBP eCLIP21.15■□□□□ 0.98
GARNL3-209ENST00000446764 RFTN1Q14699 578 aaPredicted RBP21.15■□□□□ 0.98
GARNL3-209ENST00000446764 ZFYVE27Q5T4F4 411 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 LRRC38Q5VT99 294 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 NCBP2-AS2Q69YL0 99 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 FAF2Q96CS3 445 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 OSBPL1AQ9BXW6 950 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 PREBQ9HCU5 417 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 TM9SF3Q9HD45 589 aa21.15■□□□□ 0.98
GARNL3-209ENST00000446764 TPX2Q9ULW0 747 aaKnown RBP21.15■□□□□ 0.98
GARNL3-209ENST00000446764 ZNF292O60281 2723 aa21.14■□□□□ 0.98
GARNL3-209ENST00000446764 A0A0A6YYK5 440 aaPredicted RBP21.14■□□□□ 0.97
GARNL3-209ENST00000446764 RCCD1A6NED2 376 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 C4orf47A7E2U8 309 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 ARHGAP33O14559 1287 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 INSIG1O15503 277 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 LATO43561 262 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 BUB1BO60566 1050 aaPredicted RBP21.14■□□□□ 0.97
GARNL3-209ENST00000446764 UGT2B4P06133 528 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 MAPK8P45983 427 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 NEK3P51956 506 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 RAD51Q06609 339 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 PAFAH1B3Q15102 231 aaKnown RBP21.14■□□□□ 0.97
GARNL3-209ENST00000446764 ZNF805Q5CZA5 627 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 GDPD4Q6W3E5 623 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 PARS2Q7L3T8 475 aaKnown RBP21.14■□□□□ 0.97
GARNL3-209ENST00000446764 RTKNQ9BST9 563 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 TMEM9BQ9NQ34 198 aa21.14■□□□□ 0.97
GARNL3-209ENST00000446764 SPAG17Q6Q759 2223 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 MAFKO60675 156 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 IPO7O95373 1038 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 PEX11BO96011 259 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 SYPP08247 313 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 ADRB3P13945 408 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 RGRP47804 291 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 AFF3P51826 1226 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 NEK5Q6P3R8 708 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 FBXL19Q6PCT2 694 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 TRIM69Q86WT6 500 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 RHOT1Q8IXI2 618 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 PQLC3Q8N755 202 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 TSEN2Q8NCE0 465 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 ACRBPQ8NEB7 543 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 KLHL32Q96NJ5 620 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 ZNF599Q96NL3 588 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 CINPQ9BW66 212 aaPredicted RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 GTPBP2Q9BX10 602 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 CPEB1Q9BZB8 566 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 SALL4Q9UJQ4 1053 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 ALG6Q9Y672 507 aa21.13■□□□□ 0.97
GARNL3-209ENST00000446764 TNRC6BQ9UPQ9 1833 aaKnown RBP21.13■□□□□ 0.97
GARNL3-209ENST00000446764 LRRD1A4D1F6 860 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 C3orf70A6NLC5 250 aaPredicted RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 C16orf96A6NNT2 1141 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 SPOPO43791 374 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 MFSD11O43934 449 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 RNGTTO60942 597 aaKnown RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 MAT2AP31153 395 aaKnown RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 CSNK1EP49674 416 aaKnown RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 ATXN3P54252 364 aaPredicted RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 BNC1Q01954 994 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 SLC10A7Q0GE19 358 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 GRIK2Q13002 908 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 LBRQ14739 615 aaKnown RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 TMCO4Q5TGY1 634 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 PRPF39Q86UA1 669 aaKnown RBP21.12■□□□□ 0.97
GARNL3-209ENST00000446764 ATPAF2Q8N5M1 289 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 SLC6A18Q96N87 628 aa21.12■□□□□ 0.97
GARNL3-209ENST00000446764 RNF157Q96PX1 679 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms