RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TTC33Q6PID6 262 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TMEM26Q6ZUK4 368 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SYT12Q8IV01 421 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MICU2Q8IYU8 434 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 DSELQ8IZU8 1212 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ZIM3Q96PE6 472 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 RAB11FIP5Q9BXF6 653 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 POLE3Q9NRF9 147 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PNMA8BQ9ULN7 279 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ANGPT4Q9Y264 503 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 FAM237AA0A1B0GTK4 181 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 IRGMA1A4Y4 181 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 S100GP29377 79 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 NEK3P51956 506 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CBX2Q14781 532 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PTGES3Q15185 160 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 RAP1GAP2Q684P5 730 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 DLG3Q92796 817 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 Q96MT0 163 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 COPS8Q99627 209 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MIR1-1HGQ9H1L0 117 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 A0A096LPK6 155 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 NR5A2O00482 541 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SKAP2O75563 359 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TAF13Q15543 124 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TRIP10Q15642 601 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ATXN7L2Q5T6C5 722 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PPP2R2DQ66LE6 453 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PIGZQ86VD9 579 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ANKRD49Q8WVL7 239 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CELF6Q96J87 481 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF514Q96K75 400 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MRPL57Q9BQC6 102 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 EXD2Q9NVH0 621 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF229Q9UJW7 825 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CNTNAP1P78357 1384 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 INPP4BO15327 924 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 VAV1P15498 845 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SUZ12Q15022 739 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MFSD7Q6UXD7 560 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MAB21L3Q8N8X9 362 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ATG16L2Q8NAA4 619 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ACTL7BQ9Y614 415 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 EIF4E1BA6NMX2 242 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 EML1O00423 815 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MGAT1P26572 445 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 AKT2P31751 481 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PEX19P40855 299 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D25Q3MII6 688 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TIMM50Q3ZCQ8 353 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 FAM92BQ6ZTR7 304 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 OTOP3Q7RTS5 596 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SLC44A2Q8IWA5 706 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 FAM126BQ8IXS8 530 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 EXOSC4Q9NPD3 245 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 C8orf4Q9NR00 106 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ETNK2Q9NVF9 386 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 DZANK1Q9NVP4 752 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CROTQ9UKG9 612 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 VAPBO95292 243 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 AP1S1P61966 158 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ADHFE1Q8IWW8 467 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 BRSK1Q8TDC3 778 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 METTL21AQ8WXB1 218 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 AIF1LQ9BQI0 150 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 KCNN2Q9H2S1 579 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 MID1IP1Q9NPA3 183 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 GPATCH2LQ9NWQ4 482 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 MYH2Q9UKX2 1941 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ABHD2P08910 425 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 PIM1P11309 404 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ALADP13716 330 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SMAD1Q15797 465 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TRIM40Q6P9F5 258 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 DOK6Q6PKX4 331 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 RPAINQ86UA6 219 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 IFNL1Q8IU54 200 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 RNF157Q96PX1 679 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 IFNA16P05015 189 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 RPL21P46778 160 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 MRPS35P82673 323 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 FUT10Q6P4F1 479 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 C3orf67Q6ZVT6 689 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZSWIM2Q8NEG5 633 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SELENOMQ8WWX9 145 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ACDQ96AP0 544 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SGF29Q96ES7 293 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF607Q96SK3 696 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 MAGEH1Q9H213 219 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 C10orf88Q9H8K7 445 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 IL1RL2Q9HB29 575 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZFP14Q9HCL3 533 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms