RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 IPO11Q9UI26 975 aaKnown RBP15.71■□□□□ 0.11
SEC13-213ENST00000445064 GGT7Q9UJ14 662 aa15.71■□□□□ 0.11
SEC13-213ENST00000445064 PCDHB1Q9Y5F3 818 aa15.71■□□□□ 0.11
SEC13-213ENST00000445064 C16orf96A6NNT2 1141 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 K7ESM1 405 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 KRIT1O00522 736 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 AP1G1O43747 822 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 OPA1O60313 960 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 CSF2P04141 144 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 ABL2P42684 1182 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.1
SEC13-213ENST00000445064 NRG1Q02297 640 aaPredicted RBP15.7■□□□□ 0.1
SEC13-213ENST00000445064 PLPP6Q8IY26 295 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 BAP1Q92560 729 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 KLF6Q99612 283 aaPredicted RBP15.7■□□□□ 0.1
SEC13-213ENST00000445064 C1QTNF2Q9BXJ5 285 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 GPR27Q9NS67 375 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 FAM207AQ9NSI2 230 aaPredicted RBP15.7■□□□□ 0.1
SEC13-213ENST00000445064 TMEM248Q9NWD8 314 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 ITM2BQ9Y287 266 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 KNTC1P50748 2209 aa15.7■□□□□ 0.1
SEC13-213ENST00000445064 TRPM6Q9BX84 2022 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 LY6G6EA0A0G2JKS1 128 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 SPTY2D1-AS1A0A0U1RR47 76 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 C2CD4BA6NLJ0 364 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 NEMP1O14524 444 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 FPGTO14772 594 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 EPHB6O15197 1021 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 TSPAN6O43657 245 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 LRIG2O94898 1065 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 PLEKP08567 350 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 KRT3P12035 628 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 RFC1P35251 1148 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 ACTN2P35609 894 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 SOX5P35711 763 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 ETFBP38117 255 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 MAPKAPK2P49137 400 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 PTP4A2Q12974 167 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 PDE1CQ14123 709 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 POLD3Q15054 466 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 KRT31Q15323 416 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 MYLK3Q32MK0 819 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 ZNF805Q5CZA5 627 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 CT47A1Q5JQC4 288 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 TPRG1LQ5T0D9 272 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 CDCP2Q5VXM1 449 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 STRADAQ7RTN6 431 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 CCDC185Q8N715 623 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 OR2AP1Q8NGE2 309 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 CENPIQ92674 756 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 VOPP1Q96AW1 172 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 KLHL32Q96NJ5 620 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 LENG8Q96PV6 779 aaPredicted RBP15.69■□□□□ 0.1
SEC13-213ENST00000445064 PCDHB18PQ96TA0 734 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 ABCG4Q9H172 646 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 MAGEH1Q9H213 219 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 PRORYQ9H606 182 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 KLF15Q9UIH9 416 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 HPCAL4Q9UM19 191 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 U3KQA8 63 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 CELSR3Q9NYQ7 3312 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 ATRXP46100 2492 aa15.69■□□□□ 0.1
SEC13-213ENST00000445064 BAHCC1Q9P281 2608 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 CXorf51AA0A1B0GTR3 108 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 SPINT1O43278 529 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 KDELR3O43731 214 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 POP4O95707 220 aaKnown RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 UGT2B4P06133 528 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 UNGP13051 313 aaPredicted RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 NME1P15531 152 aaKnown RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 PTPN9P43378 593 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 RABIFP47224 123 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 DUSP3P51452 185 aaPredicted RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 HDAC4P56524 1084 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 JAM2P57087 298 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 GEMIN4P57678 1058 aaKnown RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 SNRPD1P62314 119 aaKnown RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 CCDC173Q0VFZ6 552 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 ATXN7L2Q5T6C5 722 aaPredicted RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 FAM181AQ8N9Y4 354 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 NETO2Q8NC67 525 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
SEC13-213ENST00000445064 FAM172AQ8WUF8 416 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 RAB7BQ96AH8 199 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 TBC1D31Q96DN5 1066 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 DUSP23Q9BVJ7 150 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 RETREG1Q9H6L5 497 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
SEC13-213ENST00000445064 H3BM21 787 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 BUB1O43683 1085 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 RAMP2O60895 175 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 GSRP00390 522 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 PRB1P04280 392 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 MPOP05164 745 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 JUNDP17535 347 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms