RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 SLC16A12Q6ZSM3 486 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 IRF2BP2Q7Z5L9 587 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZDHHC23Q8IYP9 409 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 HORMAD2Q8N7B1 307 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 GDPD5Q8WTR4 605 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 TMEM170AQ8WVE7 144 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 ATOH1Q92858 354 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 NAP1L4Q99733 375 aaKnown RBP4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 PPP1R14DQ9NXH3 145 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 IL1RAPL1Q9NZN1 696 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 HSPB7Q9UBY9 170 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 ANAPC4Q9UJX5 808 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 CFTRP13569 1480 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 CLIP1P30622 1438 aa4.8□□□□□ -1.64
HMGB3P6-201ENST00000444896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 A0A1W2PQM1 296 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 SLC25A17O43808 307 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZC3H11AO75152 810 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CLDN7O95471 211 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 BMP15O95972 392 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 KLKB1P03952 638 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CD53P19397 219 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 TNFAIP3P21580 790 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 PPP3CCP48454 512 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CENPAP49450 140 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 BLKP51451 505 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 EFNA5P52803 228 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 TMPRSS3P57727 454 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 DUSP6Q16828 381 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 LEXMQ3ZCV2 418 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 WASHC2DQ5SRD0 308 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CADM3Q8N126 398 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 RASSF8Q8NHQ8 419 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 RFFLQ8WZ73 363 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 SLC25A28Q96A46 364 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 VCPIP1Q96JH7 1222 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 HEMGNQ9BXL5 484 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 POLDIP3Q9BY77 421 aaKnown RBP4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 KLHL31Q9H511 634 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 TASP1Q9H6P5 420 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 PCDHGB5Q9Y5G0 923 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 TTC3P53804 2025 aa4.79□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZNF521Q96K83 1311 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 ARHGAP10A1A4S6 786 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 B4E171 279 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 IFNL4K9M1U5 179 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TSPAN4O14817 238 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TACC1O75410 805 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 COX7A2P14406 83 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 CHRNB2P17787 502 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 CTPS1P17812 591 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TTKP33981 857 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 RYKP34925 604 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TSPAN7P41732 249 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 PAFAH1B1P43034 410 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 RASSF2P50749 326 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 SELENOVP59797 346 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 LAMB3Q13751 1172 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 PTGR1Q14914 329 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TWIST1Q15672 202 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 EDRF1Q3B7T1 1238 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 SLC9B1Q4ZJI4 515 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TMEM81Q6P7N7 255 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TADA2BQ86TJ2 420 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 FAM160B2Q86V87 743 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TMC8Q8IU68 726 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 ARMC8Q8IUR7 673 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 TEX19Q8NA77 164 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 MCPH1Q8NEM0 835 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZMIZ2Q8NF64 920 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 ZNF333Q96JL9 665 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 MAF1Q9H063 256 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 ISCUQ9H1K1 167 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 SLC25A18Q9H1K4 315 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 UNC45AQ9H3U1 944 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 MVB12BQ9H7P6 319 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 SNTG1Q9NSN8 517 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 SIRT3Q9NTG7 399 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 POT1Q9NUX5 634 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 KIF27Q86VH2 1401 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 VPS8Q8N3P4 1428 aa4.78□□□□□ -1.64
HMGB3P6-201ENST00000444896 CUX1P39880 1505 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 KDM3AQ9Y4C1 1321 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 RAPGEF2Q9Y4G8 1499 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 A0A096LPK6 155 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 INO80B-WBP1J3KQ70 363 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 LDLRAD4O15165 306 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 TNFSF14O43557 240 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms