RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ADAMTS14Q8WXS8 1223 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 ISG20Q96AZ6 181 aaKnown RBP11.06□□□□□ -0.64
SF3A1-203ENST00000444440 ZNF653Q96CK0 615 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 CCDC114Q96M63 670 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
SF3A1-203ENST00000444440 HDAC8Q9BY41 377 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 LRRC19Q9H756 370 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
SF3A1-203ENST00000444440 PCSK1NQ9UHG2 260 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 AP4E1Q9UPM8 1137 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 MFHAS1Q9Y4C4 1052 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
SF3A1-203ENST00000444440 NEUROG3Q9Y4Z2 214 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 FADS3Q9Y5Q0 445 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 ASXL3Q9C0F0 2248 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 RP1P56715 2156 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 KIF26BQ2KJY2 2108 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 FAM221BA6H8Z2 402 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 RASA4BC9J798 803 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 J3KR12 359 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 RASA4O43374 803 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 LRCH4O75427 683 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 GSRP00390 522 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 CAPNS1P04632 268 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 UGT2B4P06133 528 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 PROS1P07225 676 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 GZMAP12544 262 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 ITIH2P19823 946 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 IL1R2P27930 398 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 EPHA8P29322 1005 aaPredicted RBP11.05□□□□□ -0.64
SF3A1-203ENST00000444440 MIPP30301 263 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 NEK3P51956 506 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 CLDN6P56747 220 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 SERINC3Q13530 473 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 CYTH1Q15438 398 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 SETMARQ53H47 684 aaPredicted RBP11.05□□□□□ -0.64
SF3A1-203ENST00000444440 FIGNQ5HY92 759 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 TPRG1LQ5T0D9 272 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 TXNRD3NBQ6F5E7 133 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 ARHGAP36Q6ZRI8 547 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 ARHGAP12Q8IWW6 846 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 SLC22A18ASQ8N1D0 253 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 NPWQ8N729 165 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 OR13H1Q8NG92 308 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 OR2AP1Q8NGE2 309 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 CELF6Q96J87 481 aaKnown RBP11.05□□□□□ -0.64
SF3A1-203ENST00000444440 BTBD6Q96KE9 485 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 BMFQ96LC9 184 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 EPAS1Q99814 870 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 DHX35Q9H5Z1 703 aaKnown RBP11.05□□□□□ -0.64
SF3A1-203ENST00000444440 PDFQ9HBH1 243 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 DYRK4Q9NR20 520 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 PARVAQ9NVD7 372 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 MYO1AQ9UBC5 1043 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 LHX3Q9UBR4 397 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 DMTF1Q9Y222 760 aa11.05□□□□□ -0.64
SF3A1-203ENST00000444440 A0A1W2PQJ5 194 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 POM121BA6NF01 834 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 C16orf96A6NNT2 1141 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 KRIT1O00522 736 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 BUB1O43683 1085 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 SDC3O75056 442 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 PCDH8O95206 1070 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 TRIM16O95361 564 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 PIGNO95427 931 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 GYPCP04921 128 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 TPM3P06753 285 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 ETFBP38117 255 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 GRK6P43250 576 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 RECQLP46063 649 aaPredicted RBP11.04□□□□□ -0.64
SF3A1-203ENST00000444440 RGRP47804 291 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 AIF1P55008 147 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 UBASH3AP57075 661 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 TPI1P60174 286 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 DNAJC3Q13217 504 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 CPNE8Q86YQ8 564 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 UMODL1-AS1Q8N2C9 162 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 RYBPQ8N488 228 aaPredicted RBP11.04□□□□□ -0.64
SF3A1-203ENST00000444440 CPLX3Q8WVH0 158 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 NSMCE3Q96MG7 304 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 KLHL32Q96NJ5 620 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 KLF6Q99612 283 aaPredicted RBP11.04□□□□□ -0.64
SF3A1-203ENST00000444440 SLC39A8Q9C0K1 460 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 RETREG1Q9H6L5 497 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 ERVMER34-1Q9H9K5 563 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 IFNKQ9P0W0 207 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 ZMIZ1Q9ULJ6 1067 aa11.04□□□□□ -0.64
SF3A1-203ENST00000444440 ARHGEF17Q96PE2 2063 aaPredicted RBP11.04□□□□□ -0.64
SF3A1-203ENST00000444440 A0A087X0T9 212 aa11.03□□□□□ -0.64
SF3A1-203ENST00000444440 CXorf51AA0A1B0GTR3 108 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms