RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
PDLIM2-212ENST00000443561 PCDHA3Q9Y5H8 950 aa13.04□□□□□ -0.32
PDLIM2-212ENST00000443561 METTL12A8MUP2 240 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 WNT9AO14904 365 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 PLRG1O43660 514 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SEMA4FO95754 770 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 RETP07949 1114 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ACADMP11310 421 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ITIH2P19823 946 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 MAOBP27338 520 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 MPLP40238 635 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 DHPSP49366 369 aaPredicted RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 DNA2P51530 1060 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 RHOAP61586 193 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 BNC1Q01954 994 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ZBTB17Q13105 803 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 LBRQ14739 615 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SF3A2Q15428 464 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 NCEH1Q6PIU2 408 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 LPCAT2Q7L5N7 544 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 TEX26Q8N6G2 289 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 CASKIN2Q8WXE0 1202 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 RUBCNQ92622 972 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 HDAC11Q96DB2 347 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 TSGA13Q96PP4 275 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 LGMNQ99538 433 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 MGME1Q9BQP7 344 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SP110Q9HB58 689 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 FSCN3Q9NQT6 498 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 PILRBQ9UKJ0 227 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 FZD4Q9ULV1 537 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 HPCAL4Q9UM19 191 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ZFR2Q9UPR6 939 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
PDLIM2-212ENST00000443561 SCN8AQ9UQD0 1980 aa13.02□□□□□ -0.32
PDLIM2-212ENST00000443561 TSPAN11A1L157 253 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 TRAFD1O14545 582 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 UGT2B4P06133 528 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 PYGMP11217 842 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 ITGB7P26010 798 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 SERPINB6P35237 376 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 MAXP61244 160 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 DYNLT1P63172 113 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 KIF5AQ12840 1032 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 FGL2Q14314 439 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 ELF2Q15723 593 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 REXO1L1PQ8IX06 675 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 ATPAF2Q8N5M1 289 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 CNTD1Q8N815 330 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 DNASE2BQ8WZ79 361 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 BIRC7Q96CA5 298 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 HES6Q96HZ4 224 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 CEP250Q9BV73 2442 aa13.02□□□□□ -0.33
PDLIM2-212ENST00000443561 MYLKQ15746 1914 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 TCRBV7S2A1N4TA0A589 114 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 C1QTNF3-AMACRE9PGA6 284 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 KRIT1O00522 736 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 APOL1O14791 398 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 LATO43561 262 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 RHOBTB1O94844 696 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PRNPP04156 253 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 HLA-DQB2P05538 268 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 OXTRP30559 389 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PTPN7P35236 360 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 CSNK1DP48730 415 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 CREB5Q02930 508 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PPIDQ08752 370 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 NIPAL4Q0D2K0 466 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 GSE1Q14687 1217 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 TFDP3Q5H9I0 405 aa13.01□□□□□ -0.33
PDLIM2-212ENST00000443561 SPDYCQ5MJ68 293 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms