RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 H0Y8X5 98 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 DFNA5O60443 496 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PRNPP04156 253 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PLEKP08567 350 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC175P0C221 793 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 C1QTNF9P0C862 333 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GPD1P21695 349 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GLDCP23378 1020 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ETFBP38117 255 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ARRB1P49407 418 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PPP2CBP62714 309 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PPP2CAP67775 309 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GNA12Q03113 381 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 SLC18A3Q16572 532 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 INAVAQ3KP66 663 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 RAB6CQ53S08 254 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC157Q569K6 752 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF783Q6ZMS7 281 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 BNIPLQ7Z465 357 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PHF13Q86YI8 300 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 OR2A12Q8NGT7 310 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PPP1R16AQ96I34 528 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PSMB7Q99436 277 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 EIF3CQ99613 913 aaKnown RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 CDC6Q99741 560 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 RAB6CQ9H0N0 254 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 EBF2Q9HAK2 575 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GDF3Q9NR23 364 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PPARGC1AQ9UBK2 798 aaKnown RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 DNAI1Q9UI46 699 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PCDHGB2Q9Y5G2 931 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 EPN1Q9Y6I3 576 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GOLGA4Q13439 2230 aaKnown RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ZSCAN12O43309 604 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 PLRG1O43660 514 aaKnown RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 CTSKP43235 329 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 GRK6P43250 576 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 C1QBPQ07021 282 aaKnown RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 SLC20A2Q08357 652 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 STAT4Q14765 748 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 KCNT1Q5JUK3 1230 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 AGBL4Q5VU57 503 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 C22orf39Q6P5X5 142 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 SLFN11Q7Z7L1 901 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 KIAA1328Q86T90 577 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 RYBPQ8N488 228 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF830Q96NB3 372 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 MCEEQ96PE7 176 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ELF4Q99607 663 aaPredicted RBP8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ORAI3Q9BRQ5 295 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 IL36AQ9UHA7 158 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 ZFYVE26Q68DK2 2539 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 SIGLEC16A6NMB1 481 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 TMCO5BA8MYB1 307 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 RAMP2O60895 175 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 STK10O94804 968 aaKnown RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 LRIG2O94898 1065 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 PCDH8O95206 1070 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 RHOQP17081 205 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 MSNP26038 577 aaKnown RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 SERPINH1P50454 418 aaKnown RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 HDAC4P56524 1084 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 SETMARQ53H47 684 aaPredicted RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 NAPEPLDQ6IQ20 393 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 RAD9BQ6WBX8 426 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 DPY19L3Q6ZPD9 716 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC185Q8N715 623 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 TMIEQ8NEW7 156 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 LRRN4Q8WUT4 740 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 TBC1D31Q96DN5 1066 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 TRIM11Q96F44 468 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 KLK13Q9UKR3 277 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 WASF3Q9UPY6 502 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 ZKSCAN5Q9Y2L8 839 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 FCF1Q9Y324 198 aaKnown RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 NEUROG3Q9Y4Z2 214 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 KNTC1P50748 2209 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 GOLGA6L9A6NEM1 432 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 FAM72CH0Y354 149 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 TLR4O00206 839 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 LATO43561 262 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 PCDHGA12O60330 932 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 MAGEC1O60732 1142 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 CBFA2T3O75081 653 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 LEFTY1O75610 366 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 ITGAVP06756 1048 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 PROS1P07225 676 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 CTSLP07711 333 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 EPHB2P29323 1055 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 NUDT1P36639 197 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 MAPKAPK2P49137 400 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 GEMIN4P57678 1058 aaKnown RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 PTP4A2Q12974 167 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 POLD3Q15054 466 aaPredicted RBP8.92□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC122Q5T0U0 273 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 FAM72AQ5TYM5 149 aa8.92□□□□□ -0.98
USP6NL-203ENST00000443016 FAM72DQ6L9T8 149 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms