RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TTLL3Q9Y4R7 772 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.21□□□□□ -1.09
CCDC39-201ENST00000442201 MYO7AQ13402 2215 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 ILVBLA1L0T0 632 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 J3KR12 359 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TPPPO94811 219 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 SHBGP04278 402 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 RHOCP08134 193 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ABHD2P08910 425 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 MYZAPP0CAP1 466 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ALOX15P16050 662 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 SGSHP51688 502 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CBLBQ13191 982 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 KRT71Q3SY84 523 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 UBAP2Q5T6F2 1119 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 MARC1Q5VT66 337 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CAND1Q86VP6 1230 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 FAM217AQ8IXS0 508 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 FBXO36Q8NEA4 188 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 SH3RF2Q8TEC5 729 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CCT6BQ92526 530 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 LRRC39Q96DD0 335 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 PPP1R2P1Q96PQ5 205 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CDCA3Q99618 268 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CCDC77Q9BR77 488 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 VPS37BQ9H9H4 285 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 QPCTLQ9NXS2 382 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TUBA8Q9NY65 449 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 MRPS23Q9Y3D9 190 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CHD9Q3L8U1 2897 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 E2F8A0AVK6 867 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TBL1XO60907 577 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 AVILO75366 819 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 BANF1O75531 89 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 AP2A1O95782 977 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 MLNP12872 115 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 BMP8BP34820 402 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ACVRL1P37023 503 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ETFBP38117 255 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 PRSS36Q5K4E3 855 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 IL31Q6EBC2 164 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ANO7Q6IWH7 933 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TMC5Q6UXY8 1006 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 BBS7Q8IWZ6 715 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 PALM2Q8IXS6 379 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TDHQ8IZJ6 230 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CPXM2Q8N436 756 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TDRD5Q8NAT2 981 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 ARHGEF2Q92974 986 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 NDNQ99608 321 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 SMG9Q9H0W8 520 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 GLOD4Q9HC38 313 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 LRRC4CQ9HCJ2 640 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TDP1Q9NUW8 608 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 TBC1D30Q9Y2I9 924 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 AAR2Q9Y312 384 aaKnown RBP8.21□□□□□ -1.1
CCDC39-201ENST00000442201 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.1
CCDC39-201ENST00000442201 A0A0D9SEW6 157 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CFAP73A6NFT4 308 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 EPOPA6NHQ4 379 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 H0Y626 953 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 GFRA2O00451 464 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PSMD3O43242 534 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 ANXA9O76027 345 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PEX11BO96011 259 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PHBP35232 272 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 ELK3P41970 407 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 GRIA1P42261 906 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 MXRA7P84157 204 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 C12orf76Q8N812 135 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-201ENST00000442201 OR7D4Q8NG98 312 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 AGAP11Q8TF27 550 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 TIFAQ96CG3 184 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 MRPL38Q96DV4 380 aaKnown RBP8.2□□□□□ -1.1
CCDC39-201ENST00000442201 FCRL5Q96RD9 977 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 TMEM109Q9BVC6 243 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 RABEP2Q9H5N1 569 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 SFXN1Q9H9B4 322 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CTNNAL1Q9UBT7 734 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CROTQ9UKG9 612 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PAIP2BQ9ULR5 123 aaKnown RBP8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CHMP2BQ9UQN3 213 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 LRRC42Q9Y546 428 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 TEX264Q9Y6I9 313 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 EIF3FO00303 357 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CACNG3O60359 315 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 HLA-DQB2P05538 268 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 TSHRP16473 764 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 MAGEA3P43357 314 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 MMP13P45452 471 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 IFNAR2P48551 515 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 PLOD1Q02809 727 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-201ENST00000442201 SLC10A7Q0GE19 358 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 CDH18Q13634 790 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 STAT4Q14765 748 aa8.2□□□□□ -1.1
CCDC39-201ENST00000442201 MPPE1Q53F39 396 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms