RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 GDF3Q9NR23 364 aa19.24■□□□□ 0.67
HMGB3P22-201ENST00000442010 AP4E1Q9UPM8 1137 aa19.24■□□□□ 0.67
HMGB3P22-201ENST00000442010 CA5BQ9Y2D0 317 aa19.24■□□□□ 0.67
HMGB3P22-201ENST00000442010 MSRB2Q9Y3D2 182 aa19.24■□□□□ 0.67
HMGB3P22-201ENST00000442010 FADS3Q9Y5Q0 445 aa19.24■□□□□ 0.67
HMGB3P22-201ENST00000442010 EIF3CLB5ME19 914 aaKnown RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 RASA4BC9J798 803 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 FGF10O15520 208 aaPredicted RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 RASA4O43374 803 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 DESP17661 470 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 PTMSP20962 102 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 GKP32189 559 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 GRK6P43250 576 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 RXRGP48443 463 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 SNRPD1P62314 119 aaKnown RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 SERINC3Q13530 473 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 PARP15Q460N3 678 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 INO80DQ53TQ3 878 aaPredicted RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 ERMARDQ5T6L9 678 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 UNQ6494/PRO21346Q6UXR6 183 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 PARS2Q7L3T8 475 aaKnown RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 PNPLA1Q8N8W4 532 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 OR6K2Q8NGY2 324 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 CASKIN2Q8WXE0 1202 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 ZNF653Q96CK0 615 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 EIF3CQ99613 913 aaKnown RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 SNRNP25Q9BV90 132 aaKnown RBP19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 ZDHHC6Q9H6R6 413 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 LRRC19Q9H756 370 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 CAPN11Q9UMQ6 739 aa19.23■□□□□ 0.67
HMGB3P22-201ENST00000442010 SLC31A1O15431 190 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 BUB1O43683 1085 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 AP1G1O43747 822 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 LRCH4O75427 683 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 TMCC1O94876 653 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 PROS1P07225 676 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 ATXN1LP0C7T5 689 aaKnown RBP19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 MYBL1P10243 752 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 PRLRP16471 622 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 MIPP30301 263 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 TPI1P60174 286 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 ZBED6P86452 979 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 FGL2Q14314 439 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 STAT4Q14765 748 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 ST3GAL2Q16842 350 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 MYLK3Q32MK0 819 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 SEL1L3Q68CR1 1132 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 KANSL1Q7Z3B3 1105 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 GATAD2AQ86YP4 633 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 KLK6Q92876 244 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 KCTD15Q96SI1 283 aaPredicted RBP19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 PDFQ9HBH1 243 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 PCSK1NQ9UHG2 260 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 APOBEC2Q9Y235 224 aaKnown RBP19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 BZW2Q9Y6E2 419 aaKnown RBP19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 SCINQ9Y6U3 715 aa19.22■□□□□ 0.67
HMGB3P22-201ENST00000442010 C16orf96A6NNT2 1141 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 YKT6O15498 198 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 SPINT1O43278 529 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 MAGEC1O60732 1142 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 PCDH8O95206 1070 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 POP4O95707 220 aaKnown RBP19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 EPHA8P29322 1005 aaPredicted RBP19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 ABL2P42684 1182 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 ZNF805Q5CZA5 627 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 ATXN7L2Q5T6C5 722 aaPredicted RBP19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 FBXL19Q6PCT2 694 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 OXR1Q8N573 874 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 NETO2Q8NC67 525 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 IQCDQ96DY2 449 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 TRIM11Q96F44 468 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 DHX35Q9H5Z1 703 aaKnown RBP19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 MFHAS1Q9Y4C4 1052 aa19.21■□□□□ 0.67
HMGB3P22-201ENST00000442010 GOLGA6L19H0YKK7 550 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 EEF2KO00418 725 aaKnown RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 KRIT1O00522 736 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 TNFSF14O43557 240 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 RNF8O76064 485 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 GYPCP04921 128 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 HNRNPA2B1P22626 353 aaKnown RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 NDST2P52849 883 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 BNIP3Q12983 259 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 CYTH1Q15438 398 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 AFMIDQ63HM1 303 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 KIAA1161Q6NSJ0 714 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 ABI3BPQ7Z7G0 1075 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 PSTKQ8IV42 348 aaKnown RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 RYBPQ8N488 228 aaPredicted RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 KDF1Q8NAX2 398 aaPredicted RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 KLHDC7BQ96G42 594 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 GDAP1L1Q96MZ0 367 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 SLC39A8Q9C0K1 460 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 MRPL47Q9HD33 250 aaKnown RBP19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 FZD3Q9NPG1 666 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 MYO1AQ9UBC5 1043 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 LHX3Q9UBR4 397 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 SHROOM3Q8TF72 1996 aa19.2■□□□□ 0.66
HMGB3P22-201ENST00000442010 PRPSAP2O60256 369 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms