RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 SERINC3Q13530 473 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 SUZ12Q15022 739 aaKnown RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 SPA17Q15506 151 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 INO80DQ53TQ3 878 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 PPP6R3Q5H9R7 873 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 KCNT1Q5JUK3 1230 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 LAYNQ6UX15 382 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 OR2A12Q8NGT7 310 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 TSC1Q92574 1164 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CALR3Q96L12 384 aaKnown RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CAMK1GQ96NX5 476 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 KLC2Q9H0B6 622 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 PCDH18Q9HCL0 1135 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 PCOLCE2Q9UKZ9 415 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 SARDHQ9UL12 918 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3DA0A087WVF3 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3IA0A087WXS9 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3EA0A087X179 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3KA0A087X1G2 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3FA6NER0 549 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3LB9A6J9 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 K7ERQ8 282 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 SMAD6O43541 496 aaKnown RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 CBFA2T3O75081 653 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 NDUFA10O95299 355 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 IPO7O95373 1038 aaKnown RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 PRNPP04156 253 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3HP0C7X1 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 SLC1A1P43005 524 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 RECQLP46063 649 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 METAP1P53582 386 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 FAM193AP78312 1265 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 CNTN1Q12860 1018 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 SMTNL2Q2TAL5 461 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 SLC45A4Q5BKX6 768 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 AGBL4Q5VU57 503 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3GQ6DHY5 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TXNRD3NBQ6F5E7 133 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3CQ6IPX1 549 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 LINGO4Q6UY18 593 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 GLRX5Q86SX6 157 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 VSIG1Q86XK7 387 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TBC1D3Q8IZP1 549 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 TMIEQ8NEW7 156 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 SETD7Q8WTS6 366 aaKnown RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 HSPH1Q92598 858 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 HMCESQ96FZ2 354 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 CSPG4P5Q96PW8 444 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 AASDHPPTQ9NRN7 309 aa18.53■□□□□ 0.56
SMPD4-210ENST00000441135 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-210ENST00000441135 ARHGAP42A6NI28 874 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 ZNF487B1APH4 448 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PCDHGA12O60330 932 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 ZNF821O75541 412 aaPredicted RBP18.52■□□□□ 0.56
SMPD4-210ENST00000441135 CD38P28907 300 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 CHRNA3P32297 505 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 ARSEP51690 589 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PPP2CBP62714 309 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PPP2CAP67775 309 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PDK2Q15119 407 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 ST3GAL2Q16842 350 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 LRRC38Q5VT99 294 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 NAPEPLDQ6IQ20 393 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 DBX2Q6ZNG2 339 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
SMPD4-210ENST00000441135 TRIM69Q86WT6 500 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 SERAC1Q96JX3 654 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 CDC6Q99741 560 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 ZNF670Q9BS34 389 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 SCNM1Q9BWG6 230 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 EBF2Q9HAK2 575 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PREBQ9HCU5 417 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 DYRK4Q9NR20 520 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 DMTF1Q9Y222 760 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 NEUROG3Q9Y4Z2 214 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PCDHA13Q9Y5I0 950 aa18.52■□□□□ 0.56
SMPD4-210ENST00000441135 PCNX2A6NKB5 2137 aa18.52■□□□□ 0.55
SMPD4-210ENST00000441135 H0Y8X5 98 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 PLK4O00444 970 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 KPNA3O00505 521 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-210ENST00000441135 GSRP00390 522 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 SERPINB6P35237 376 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 CDH6P55285 790 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 MESDQ14696 234 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 POM121L1PQ3SYA9 428 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 MAP7D3Q8IWC1 876 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 ARHGAP12Q8IWW6 846 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 BAHD1Q8TBE0 780 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-210ENST00000441135 PPP1R16AQ96I34 528 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 LRIG1Q96JA1 1093 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 BAG1Q99933 345 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-210ENST00000441135 PDFQ9HBH1 243 aa18.51■□□□□ 0.55
SMPD4-210ENST00000441135 APOBEC2Q9Y235 224 aaKnown RBP18.51■□□□□ 0.55
SMPD4-210ENST00000441135 MAP1BP46821 2468 aaKnown RBP18.5■□□□□ 0.55
SMPD4-210ENST00000441135 A0A1W2PR77 199 aa18.5■□□□□ 0.55
SMPD4-210ENST00000441135 SOWAHDA6NJG2 315 aa18.5■□□□□ 0.55
SMPD4-210ENST00000441135 BTNL10A8MVZ5 291 aa18.5■□□□□ 0.55
SMPD4-210ENST00000441135 YKT6O15498 198 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms