RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TGM1P22735 817 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ITPKAP23677 461 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ITGB7P26010 798 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CTNNA2P26232 953 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CTNNA1P35221 906 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 HSPA9P38646 679 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 GARSP41250 739 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CDKN2BP42772 138 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 RENBPP51606 427 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 METAP1P53582 386 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ADPRHP54922 357 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CCZ1BP86790 482 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CCZ1P86791 482 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 SPEM2Q0P670 501 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CNTN1Q12860 1018 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 LBRQ14739 615 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 PIP5KL1Q5T9C9 394 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 DCAF12L1Q5VU92 463 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 KIAA0895LQ68EN5 471 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 TIGD7Q6NT04 549 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 MFSD7Q6UXD7 560 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF662Q6ZS27 426 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ERN2Q76MJ5 926 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ARMCX6Q7L4S7 300 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 RABEPKQ7Z6M1 372 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 LRRC57Q8N9N7 239 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 OR14C36Q8NHC7 312 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CEP76Q8TAP6 659 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 PIGKQ92643 395 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ARRDC3Q96B67 414 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF830Q96NB3 372 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 TSGA13Q96PP4 275 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 PSKH2Q96QS6 385 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CPEB1Q9BZB8 566 aaKnown RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 C6orf106Q9H6K1 298 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ZDHHC6Q9H6R6 413 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 SEMA4GQ9NTN9 838 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 SUSD2Q9UGT4 822 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 PCDHA3Q9Y5H8 950 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 THADAQ6YHU6 1953 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 C10orf142B7Z368 130 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 PLRG1O43660 514 aaKnown RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 CCDC175P0C221 793 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 CCNCP24863 283 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 MAPK8P45983 427 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 NR2C2P49116 596 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 CCR5P51681 352 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 NEK3P51956 506 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 COPS2P61201 443 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 GBE1Q04446 702 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 SLC10A7Q0GE19 358 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 HNRNPDQ14103 355 aaKnown RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TFDP2Q14188 446 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 PPP2R5EQ16537 467 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 POM121L1PQ3SYA9 428 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TFDP3Q5H9I0 405 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 RALGPS1Q5JS13 557 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 MARC1Q5VT66 337 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 NEK5Q6P3R8 708 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 NCEH1Q6PIU2 408 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 GDPD4Q6W3E5 623 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 SPOCD1Q6ZMY3 1216 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 BZW1Q7L1Q6 419 aaKnown RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 NT5DC3Q86UY8 548 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 RFX6Q8HWS3 928 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 RGL4Q8IZJ4 473 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 PLD5Q8N7P1 536 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TSEN2Q8NCE0 465 aaKnown RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 HCAR2Q8TDS4 363 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 KRT35Q92764 455 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 VOPP1Q96AW1 172 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 HDAC11Q96DB2 347 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TUBGCP5Q96RT8 1024 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 BRD8Q9H0E9 1235 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 PREBQ9HCU5 417 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 HAUS2Q9NVX0 235 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 DTLQ9NZJ0 730 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TRIM10Q9UDY6 481 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 EVLQ9UI08 416 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 AMFRQ9UKV5 643 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.98□□□□□ -0.49
HSPG2-206ENST00000439717 SPAG17Q6Q759 2223 aa11.98□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3DA0A087WVF3 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3IA0A087WXS9 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3EA0A087X179 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3KA0A087X1G2 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 A0A0U1RQJ8 604 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3FA6NER0 549 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 FAM47DPA6NHR8 397 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 MIF4GDA9UHW6 222 aaKnown RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 PRR5-ARHGAP8B1AHC4 643 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3LB9A6J9 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms