RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RBP1P09455 135 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 LAG3P18627 525 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 ITGALP20701 1170 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 PITX1P78337 314 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 CTBP1Q13363 440 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■■□□□ 12.1
TRAPPC9-202ENST00000438773 MED21Q13503 144 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 PDK4Q16654 411 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 UPP1Q16831 310 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 IFNEQ86WN2 208 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 THAP1Q9NVV9 213 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 UTP6Q9NYH9 597 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 CHKBQ9Y259 395 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 LMNAP02545 664 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 IVDP26440 423 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 MTFR1Q15390 333 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCDC153Q494R4 210 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 NAT8LQ8N9F0 302 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 KBTBD7Q8WVZ9 684 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCDC126Q96EE4 140 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 RNF103-CHMP3A0A140T963 221 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAM95CA0A1B0GW59 222 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 TBL1XO60907 577 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 LINGO3P0C6S8 592 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 RHOQP17081 205 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 PTPN3P26045 913 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC1A6P48664 564 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 ANKRD20A4Q4UJ75 823 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 UBXN11Q5T124 520 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 NCBP2-AS2Q69YL0 99 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 PACS1Q6VY07 963 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 C12orf65Q9H3J6 166 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 ASAH2Q9NR71 780 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 WARS2Q9UGM6 360 aaKnown RBP11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 FBXO5Q9UKT4 447 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 RNF112Q9ULX5 631 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 PHIPQ8WWQ0 1821 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.54
TRAPPC9-202ENST00000438773 AP2A1O95782 977 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 MT-CYBP00156 380 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 FGBP02675 491 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLK1P53350 603 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 ESRRGP62508 458 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZNF252P-AS1Q0IIN9 211 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 RASA2Q15283 850 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 SEL1L3Q68CR1 1132 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 POTEHQ6S545 545 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 ANKS1BQ7Z6G8 1248 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 CHRAC1Q9NRG0 131 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLK2Q9NYY3 685 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC17A7Q9P2U7 560 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 DNAJB4Q9UDY4 337 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 BAG5Q9UL15 447 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRIM16O95361 564 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 MAPRE2Q15555 327 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 ARMC3Q5W041 872 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZBTB46Q86UZ6 589 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 MFSD3Q96ES6 412 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 FBXO6Q9NRD1 293 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 V9GYQ6 96 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 A8MX80 341 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 E9PBE3 544 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 TLL1O43897 1013 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 KLHL41O60662 606 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 XYLBO75191 536 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 CRABP2P29373 138 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 GAD2Q05329 585 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 BCL2L1Q07817 233 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 MOGSQ13724 837 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 UGT3A1Q6NUS8 523 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAM13CQ8NE31 585 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 CASP10Q92851 521 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 TMEM209Q96SK2 561 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 RABGEF1Q9UJ41 708 aa11.7□□□□□ -0.54
TRAPPC9-202ENST00000438773 DPPA5A6NC42 116 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ABLIM1O14639 778 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 EFCAB14O75071 495 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCNCP24863 283 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CORO1AP31146 461 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 GRIA1P42261 906 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TM4SF4P48230 202 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CDK18Q07002 472 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms